Analysis of interatomic Contacts of Structural Units in PDB entry:
2RE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RE9 entry

There are 3 chains in PDB entry 2RE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 17LEU 180
B
 LEU 17LEU 180
C
 LEU 17LEU 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 2RE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
161 165Right-handed 310
Helix 2
2
B
161 165Right-handed 310
Helix 3
3
C
19 23Right-handed 310
Helix 4
4
C
161 165Right-handed 310
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There are 9 sheets in PDB entry 2RE9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
25 30anti-parallel
Strand 3
A
56 58anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
25 30anti-parallel
Strand 3
A
174 179anti-parallel
Strand 4
A
74 87anti-parallel
Strand 5
A
136 149anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 64first strand
Strand 2
A
67 69anti-parallel
Strand 3
A
154 159anti-parallel
Strand 4
A
104 113anti-parallel
Strand 5
A
121 130anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
25 30anti-parallel
Strand 3
B
56 58anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
25 30anti-parallel
Strand 3
B
174 179anti-parallel
Strand 4
B
74 87anti-parallel
Strand 5
B
136 149anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 64first strand
Strand 2
B
67 69anti-parallel
Strand 3
B
154 159anti-parallel
Strand 4
B
104 113anti-parallel
Strand 5
B
121 130anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 49first strand
Strand 2
C
25 30anti-parallel
Strand 3
C
56 58anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 49first strand
Strand 2
C
25 30anti-parallel
Strand 3
C
174 179anti-parallel
Strand 4
C
74 87anti-parallel
Strand 5
C
136 149anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
62 64first strand
Strand 2
C
67 69anti-parallel
Strand 3
C
154 159anti-parallel
Strand 4
C
104 114anti-parallel
Strand 5
C
117 130anti-parallel
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