Analysis of interatomic Contacts of Structural Units in PDB entry:
2REM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2REM entry

There are 4 chains in PDB entry 2REM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 4GLY 193
B
 HIS 4ALA 190
C
 ASN 3GLY 193
T
 UNK 2UNK 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 2REM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 54Right-handed alpha
Helix 2
2
A
71 85Right-handed alpha
Helix 3
3
A
87 101Right-handed alpha
Helix 4
4
A
111 121Right-handed alpha
Helix 5
5
A
125 134Right-handed alpha
Helix 6
6
A
135 153Right-handed alpha
Helix 7
7
A
172 192Right-handed alpha
Helix 8
8
B
38 54Right-handed alpha
Helix 9
9
B
71 85Right-handed alpha
Helix 10
10
B
87 101Right-handed alpha
Helix 11
11
B
111 121Right-handed alpha
Helix 12
12
B
125 134Right-handed alpha
Helix 13
13
B
135 153Right-handed alpha
Helix 14
14
B
172 190Right-handed alpha
Helix 15
15
C
38 54Right-handed alpha
Helix 16
16
C
71 85Right-handed alpha
Helix 17
17
C
87 101Right-handed alpha
Helix 18
18
C
111 121Right-handed alpha
Helix 19
19
C
125 134Right-handed alpha
Helix 20
20
C
135 153Right-handed alpha
Helix 21
21
C
172 192Right-handed alpha
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There are 4 sheets in PDB entry 2REM. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 14first strand
Strand 2
A
166 168anti-parallel
Strand 3
A
159 162anti-parallel
Strand 4
A
28 34anti-parallel
Strand 5
A
59 65parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 14first strand
Strand 2
B
166 168anti-parallel
Strand 3
B
159 162anti-parallel
Strand 4
B
28 34anti-parallel
Strand 5
B
59 65parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 14first strand
Strand 2
C
166 168anti-parallel
Strand 3
C
159 162anti-parallel
Strand 4
C
28 34anti-parallel
Strand 5
C
59 65parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
156 157first strand
Strand 2
T
5 6anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il