Analysis of interatomic Contacts of Structural Units in PDB entry:
2RFM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RFM entry

There are 2 chains in PDB entry 2RFM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 7ALA 189
B
 GLU 6ALA 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 2RFM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 12Right-handed 310
Helix 2
2
A
13 20Right-handed alpha
Helix 3
3
A
20 26Right-handed alpha
Helix 4
4
A
34 43Right-handed alpha
Helix 5
5
A
44 46Right-handed 310
Helix 6
6
A
47 56Right-handed alpha
Helix 7
7
A
67 75Right-handed alpha
Helix 8
8
A
77 88Right-handed alpha
Helix 9
9
A
100 109Right-handed alpha
Helix 10
10
A
110 120Right-handed alpha
Helix 11
11
A
133 142Right-handed alpha
Helix 12
12
A
143 153Right-handed alpha
Helix 13
13
A
166 174Right-handed alpha
Helix 14
14
A
176 189Right-handed alpha
Helix 15
15
B
13 20Right-handed alpha
Helix 16
16
B
20 27Right-handed alpha
Helix 17
17
B
34 43Right-handed alpha
Helix 18
18
B
44 46Right-handed 310
Helix 19
19
B
47 56Right-handed alpha
Helix 20
20
B
67 75Right-handed alpha
Helix 21
21
B
77 87Right-handed alpha
Helix 22
22
B
100 109Right-handed alpha
Helix 23
23
B
110 119Right-handed alpha
Helix 24
24
B
133 142Right-handed alpha
Helix 25
25
B
143 153Right-handed alpha
Helix 26
26
B
166 175Right-handed alpha
Helix 27
27
B
176 189Right-handed alpha
Back to top of page
There are no sheets in PDB entry 2RFM
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il