Analysis of interatomic Contacts of Structural Units in PDB entry:
2RFO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RFO entry

There are 2 chains in PDB entry 2RFO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 204ILE 835
B
 ASN 206ILE 833
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 63 helices in PDB entry 2RFO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
208 228Right-handed alpha
Helix 2
2
A
233 244Right-handed alpha
Helix 3
3
A
248 263Right-handed alpha
Helix 4
4
A
270 291Right-handed alpha
Helix 5
5
A
301 311Right-handed alpha
Helix 6
6
A
333 342Right-handed alpha
Helix 7
7
A
346 356Right-handed alpha
Helix 8
8
A
364 375Right-handed alpha
Helix 9
9
A
387 397Right-handed alpha
Helix 10
10
A
406 417Right-handed alpha
Helix 11
11
A
431 442Right-handed alpha
Helix 12
12
A
459 469Right-handed alpha
Helix 13
13
A
471 474Right-handed alpha
Helix 14
14
A
478 484Right-handed alpha
Helix 15
16
A
500 513Right-handed alpha
Helix 16
17
A
534 544Right-handed alpha
Helix 17
18
A
550 562Right-handed alpha
Helix 18
19
A
566 583Right-handed alpha
Helix 19
20
A
585 590Right-handed alpha
Helix 20
21
A
602 610Right-handed alpha
Helix 21
22
A
618 634Right-handed alpha
Helix 22
23
A
638 646Right-handed alpha
Helix 23
24
A
650 666Right-handed alpha
Helix 24
25
A
685 696Right-handed alpha
Helix 25
26
A
700 705Right-handed alpha
Helix 26
27
A
708 727Right-handed alpha
Helix 27
28
A
732 742Right-handed alpha
Helix 28
29
A
751 762Right-handed alpha
Helix 29
30
A
764 769Right-handed alpha
Helix 30
31
A
771 786Right-handed alpha
Helix 31
33
A
803 819Right-handed alpha
Helix 32
34
A
830 834Right-handed alpha
Helix 33
35
B
208 228Right-handed alpha
Helix 34
36
B
233 244Right-handed alpha
Helix 35
37
B
248 264Right-handed alpha
Helix 36
38
B
270 290Right-handed alpha
Helix 37
39
B
301 311Right-handed alpha
Helix 38
40
B
333 342Right-handed alpha
Helix 39
41
B
346 357Right-handed alpha
Helix 40
42
B
365 374Right-handed alpha
Helix 41
43
B
386 397Right-handed alpha
Helix 42
44
B
406 416Right-handed alpha
Helix 43
45
B
432 441Right-handed alpha
Helix 44
46
B
459 469Right-handed alpha
Helix 45
47
B
471 474Right-handed alpha
Helix 46
48
B
478 484Right-handed alpha
Helix 47
49
B
488 496Right-handed alpha
Helix 48
50
B
500 513Right-handed alpha
Helix 49
51
B
534 543Right-handed alpha
Helix 50
52
B
550 562Right-handed alpha
Helix 51
53
B
566 583Right-handed alpha
Helix 52
54
B
586 589Right-handed alpha
Helix 53
55
B
603 610Right-handed alpha
Helix 54
56
B
617 634Right-handed alpha
Helix 55
57
B
638 646Right-handed alpha
Helix 56
58
B
650 666Right-handed alpha
Helix 57
59
B
685 696Right-handed alpha
Helix 58
60
B
700 704Right-handed alpha
Helix 59
61
B
708 728Right-handed alpha
Helix 60
62
B
732 741Right-handed alpha
Helix 61
63
B
751 760Right-handed alpha
Helix 62
64
B
765 788Right-handed alpha
Helix 63
65
B
800 820Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2RFO. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 328first strand
Strand 2
A
331 332anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 328first strand
Strand 2
B
331 332anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
591 593first strand
Strand 2
A
599 601anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
591 593first strand
Strand 2
B
599 601anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il