Analysis of interatomic Contacts of Structural Units in PDB entry:
2RG0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RG0 entry

There are 4 chains in PDB entry 2RG0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 2PHE 430
B
ARG 2PHE 430
C
ARG 2PHE 430
D
ARG 2PHE 430
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 2RG0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
36 39Right-handed 310
Helix 2
2
A
61 69Right-handed alpha
Helix 3
3
A
163 168Right-handed 310
Helix 4
4
A
239 243Right-handed 310
Helix 5
5
A
264 268Right-handed 310
Helix 6
6
A
325 331Right-handed alpha
Helix 7
7
A
332 337Right-handed alpha
Helix 8
8
A
346 356Right-handed alpha
Helix 9
9
A
373 378Right-handed alpha
Helix 10
10
A
401 409Right-handed alpha
Helix 11
11
B
35 39Right-handed 310
Helix 12
12
B
63 69Right-handed alpha
Helix 13
13
B
76 82Right-handed alpha
Helix 14
14
B
163 168Right-handed 310
Helix 15
15
B
241 243Right-handed 310
Helix 16
16
B
325 337Right-handed alpha
Helix 17
17
B
340 345Right-handed alpha
Helix 18
18
B
347 357Right-handed alpha
Helix 19
19
B
401 409Right-handed alpha
Helix 20
20
C
36 39Right-handed 310
Helix 21
21
C
63 68Right-handed 310
Helix 22
22
C
163 168Right-handed 310
Helix 23
23
C
264 269Right-handed alpha
Helix 24
24
C
327 337Right-handed alpha
Helix 25
25
C
340 345Right-handed alpha
Helix 26
26
C
346 355Right-handed alpha
Helix 27
27
C
373 378Right-handed alpha
Helix 28
28
C
403 407Right-handed 310
Helix 29
29
D
76 81Right-handed alpha
Helix 30
30
D
241 243Right-handed 310
Helix 31
31
D
325 331Right-handed alpha
Helix 32
32
D
340 345Right-handed alpha
Helix 33
33
D
348 356Right-handed alpha
Helix 34
34
D
373 378Right-handed alpha
Helix 35
35
D
401 407Right-handed alpha
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There are 36 sheets in PDB entry 2RG0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2 3first strand
Strand 2
A
70 71parallel
Strand 3
A
41 42anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
24 28first strand
Strand 2
A
16 21anti-parallel
Strand 3
A
416 423parallel
Strand 4
A
125 131anti-parallel
Strand 5
A
286 293anti-parallel
Strand 6
A
296 303anti-parallel
Strand 7
A
306 308anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
31 34first strand
Strand 2
A
106 111anti-parallel
Strand 3
A
359 367anti-parallel
Strand 4
A
119 120anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
31 34first strand
Strand 2
A
106 111anti-parallel
Strand 3
A
359 367anti-parallel
Strand 4
A
140 147anti-parallel
Strand 5
A
212 218anti-parallel
Strand 6
A
223 228anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
50 51first strand
Strand 2
A
54 55anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
83 85first strand
Strand 2
A
90 93anti-parallel
Strand 3
A
413 414anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
95 96first strand
Strand 2
A
103 104anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
182 183first strand
Strand 2
A
186 187anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
208 209first strand
Strand 2
A
236 237anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
274 275first strand
Strand 2
A
280 281parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2 3first strand
Strand 2
B
70 71parallel
Strand 3
B
41 42anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
25 28first strand
Strand 2
B
16 19anti-parallel
Strand 3
B
413 423parallel
Strand 4
B
89 93anti-parallel
Strand 5
B
84 86anti-parallel
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There are 7 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
25 28first strand
Strand 2
B
16 19anti-parallel
Strand 3
B
413 423parallel
Strand 4
B
125 132anti-parallel
Strand 5
B
286 293anti-parallel
Strand 6
B
296 303anti-parallel
Strand 7
B
306 308anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
95 98first strand
Strand 2
B
101 104anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
107 109first strand
Strand 2
B
359 364anti-parallel
Strand 3
B
119 120anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
107 109first strand
Strand 2
B
359 364anti-parallel
Strand 3
B
144 147anti-parallel
Strand 4
B
212 216anti-parallel
Strand 5
B
226 228anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
193 194first strand
Strand 2
B
202 203anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
206 209first strand
Strand 2
B
236 239anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
274 275first strand
Strand 2
B
280 281parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
2 3first strand
Strand 2
C
70 72parallel
Strand 3
C
40 42anti-parallel
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There are 5 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
27 29first strand
Strand 2
C
15 18anti-parallel
Strand 3
C
415 423parallel
Strand 4
C
89 92anti-parallel
Strand 5
C
83 86anti-parallel
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There are 7 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
27 29first strand
Strand 2
C
15 18anti-parallel
Strand 3
C
415 423parallel
Strand 4
C
125 132anti-parallel
Strand 5
C
288 293anti-parallel
Strand 6
C
296 303anti-parallel
Strand 7
C
306 308anti-parallel
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There are 6 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
33 34first strand
Strand 2
C
106 109anti-parallel
Strand 3
C
360 366anti-parallel
Strand 4
C
141 147anti-parallel
Strand 5
C
212 219anti-parallel
Strand 6
C
222 224anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
95 96first strand
Strand 2
C
103 104anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
182 183first strand
Strand 2
C
186 187anti-parallel
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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
193 194first strand
Strand 2
C
202 203anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
207 209first strand
Strand 2
C
236 238anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
274 275first strand
Strand 2
C
280 281parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
25 26first strand
Strand 2
D
17 19anti-parallel
Strand 3
D
413 423parallel
Strand 4
D
89 93anti-parallel
Strand 5
D
83 86anti-parallel
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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
25 26first strand
Strand 2
D
17 19anti-parallel
Strand 3
D
413 423parallel
Strand 4
D
125 131anti-parallel
Strand 5
D
286 293anti-parallel
Strand 6
D
296 303anti-parallel
Strand 7
D
306 308anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
32 34first strand
Strand 2
D
106 110anti-parallel
Strand 3
D
359 366anti-parallel
Strand 4
D
119 120anti-parallel
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There are 6 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
32 34first strand
Strand 2
D
106 110anti-parallel
Strand 3
D
359 366anti-parallel
Strand 4
D
141 147anti-parallel
Strand 5
D
212 218anti-parallel
Strand 6
D
223 228anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
95 96first strand
Strand 2
D
103 104anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
193 194first strand
Strand 2
D
202 203anti-parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
206 209first strand
Strand 2
D
236 239anti-parallel
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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
274 275first strand
Strand 2
D
280 281parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il