Analysis of interatomic Contacts of Structural Units in PDB entry:
2RGJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RGJ entry

There is 1 chain in PDB entry 2RGJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4PRO 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2RGJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 26Right-handed alpha
Helix 2
2
A
50 60Right-handed alpha
Helix 3
3
A
62 68Right-handed alpha
Helix 4
4
A
92 96Right-handed 310
Helix 5
5
A
106 122Right-handed alpha
Helix 6
6
A
123 126Right-handed 310
Helix 7
7
A
169 176Right-handed alpha
Helix 8
8
A
222 228Right-handed alpha
Helix 9
9
A
241 245Right-handed alpha
Helix 10
10
A
258 263Right-handed alpha
Helix 11
11
A
264 266Right-handed 310
Helix 12
12
A
275 282Right-handed alpha
Helix 13
13
A
309 314Right-handed alpha
Helix 14
14
A
322 340Right-handed alpha
Helix 15
15
A
342 378Right-handed alpha
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There are 4 sheets in PDB entry 2RGJ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 128first strand
Strand 2
A
30 35parallel
Strand 3
A
6 10parallel
Strand 4
A
160 163parallel
Strand 5
A
305 307parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 49first strand
Strand 2
A
102 105anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 90first strand
Strand 2
A
75 79anti-parallel
Strand 3
A
204 209parallel
Strand 4
A
215 220anti-parallel
Strand 5
A
231 240anti-parallel
Strand 6
A
183 196anti-parallel
Strand 7
A
283 293anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 137first strand
Strand 2
A
142 147anti-parallel
Strand 3
A
153 158anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il