Analysis of interatomic Contacts of Structural Units in PDB entry:
2RGK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RGK entry

There are 6 chains in PDB entry 2RGK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 413
B
 MET 1LYS 413
C
 MET 1LYS 413
D
 MET 1LYS 413
E
 MET 1LYS 413
F
 MET 1LYS 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 2RGK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 25Right-handed alpha
Helix 2
2
A
43 47Right-handed 310
Helix 3
3
A
50 66Right-handed alpha
Helix 4
4
A
70 83Right-handed alpha
Helix 5
5
A
110 125Right-handed alpha
Helix 6
6
A
130 146Right-handed alpha
Helix 7
7
A
171 187Right-handed alpha
Helix 8
8
A
190 205Right-handed alpha
Helix 9
9
A
208 213Right-handed 310
Helix 10
10
A
245 266Right-handed alpha
Helix 11
11
A
272 290Right-handed alpha
Helix 12
12
A
315 333Right-handed alpha
Helix 13
13
A
335 352Right-handed alpha
Helix 14
14
A
384 389Right-handed alpha
Helix 15
15
A
390 393Right-handed 310
Helix 16
16
A
398 405Right-handed alpha
Helix 17
17
B
6 25Right-handed alpha
Helix 18
18
B
43 47Right-handed 310
Helix 19
19
B
50 66Right-handed alpha
Helix 20
20
B
70 82Right-handed alpha
Helix 21
21
B
110 125Right-handed alpha
Helix 22
22
B
130 146Right-handed alpha
Helix 23
23
B
171 187Right-handed alpha
Helix 24
24
B
190 205Right-handed alpha
Helix 25
25
B
208 213Right-handed 310
Helix 26
26
B
245 266Right-handed alpha
Helix 27
27
B
272 290Right-handed alpha
Helix 28
28
B
315 333Right-handed alpha
Helix 29
29
B
334 352Right-handed alpha
Helix 30
30
B
384 389Right-handed alpha
Helix 31
31
B
390 393Right-handed 310
Helix 32
32
B
398 405Right-handed alpha
Helix 33
33
C
6 25Right-handed alpha
Helix 34
34
C
43 47Right-handed 310
Helix 35
35
C
50 66Right-handed alpha
Helix 36
36
C
70 83Right-handed alpha
Helix 37
37
C
110 125Right-handed alpha
Helix 38
38
C
130 146Right-handed alpha
Helix 39
39
C
171 187Right-handed alpha
Helix 40
40
C
191 205Right-handed alpha
Helix 41
41
C
208 213Right-handed 310
Helix 42
42
C
245 265Right-handed alpha
Helix 43
43
C
272 289Right-handed alpha
Helix 44
44
C
315 333Right-handed alpha
Helix 45
45
C
334 352Right-handed alpha
Helix 46
46
C
384 389Right-handed alpha
Helix 47
47
C
390 393Right-handed 310
Helix 48
48
C
398 405Right-handed alpha
Helix 49
49
D
6 25Right-handed alpha
Helix 50
50
D
43 47Right-handed 310
Helix 51
51
D
50 66Right-handed alpha
Helix 52
52
D
70 82Right-handed alpha
Helix 53
53
D
110 125Right-handed alpha
Helix 54
54
D
130 146Right-handed alpha
Helix 55
55
D
171 187Right-handed alpha
Helix 56
56
D
191 205Right-handed alpha
Helix 57
57
D
208 212Right-handed 310
Helix 58
58
D
245 266Right-handed alpha
Helix 59
59
D
272 290Right-handed alpha
Helix 60
60
D
315 333Right-handed alpha
Helix 61
61
D
335 352Right-handed alpha
Helix 62
62
D
384 389Right-handed alpha
Helix 63
63
D
390 393Right-handed 310
Helix 64
64
D
398 405Right-handed alpha
Helix 65
65
E
6 25Right-handed alpha
Helix 66
66
E
43 47Right-handed 310
Helix 67
67
E
50 66Right-handed alpha
Helix 68
68
E
70 82Right-handed alpha
Helix 69
69
E
110 125Right-handed alpha
Helix 70
70
E
130 146Right-handed alpha
Helix 71
71
E
171 187Right-handed alpha
Helix 72
72
E
191 205Right-handed alpha
Helix 73
73
E
209 213Right-handed 310
Helix 74
74
E
245 266Right-handed alpha
Helix 75
75
E
272 290Right-handed alpha
Helix 76
76
E
315 333Right-handed alpha
Helix 77
77
E
334 352Right-handed alpha
Helix 78
78
E
384 389Right-handed alpha
Helix 79
79
E
390 393Right-handed 310
Helix 80
80
E
398 405Right-handed alpha
Helix 81
81
F
6 25Right-handed alpha
Helix 82
82
F
43 47Right-handed 310
Helix 83
83
F
50 66Right-handed alpha
Helix 84
84
F
70 82Right-handed alpha
Helix 85
85
F
110 125Right-handed alpha
Helix 86
86
F
130 146Right-handed alpha
Helix 87
87
F
171 187Right-handed alpha
Helix 88
88
F
191 205Right-handed alpha
Helix 89
89
F
245 266Right-handed alpha
Helix 90
90
F
272 290Right-handed alpha
Helix 91
91
F
315 333Right-handed alpha
Helix 92
92
F
335 352Right-handed alpha
Helix 93
93
F
384 389Right-handed alpha
Helix 94
94
F
390 393Right-handed 310
Helix 95
95
F
398 405Right-handed alpha
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There are 36 sheets in PDB entry 2RGK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
32 33anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
97 99anti-parallel
Strand 3
A
102 105anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
157 158anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
153 154anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
219 220anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 314first strand
Strand 2
A
363 364anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 29first strand
Strand 2
B
32 33anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
97 98anti-parallel
Strand 3
B
103 105anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 109first strand
Strand 2
B
157 158anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 148first strand
Strand 2
B
153 154anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 170first strand
Strand 2
B
219 220anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
313 314first strand
Strand 2
B
363 364anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 29first strand
Strand 2
C
32 33anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 49first strand
Strand 2
C
97 99anti-parallel
Strand 3
C
102 105anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
108 109first strand
Strand 2
C
157 158anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
147 148first strand
Strand 2
C
153 154anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 170first strand
Strand 2
C
219 220anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
313 314first strand
Strand 2
C
363 364anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
28 29first strand
Strand 2
D
32 33anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 49first strand
Strand 2
D
97 99anti-parallel
Strand 3
D
102 105anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
108 109first strand
Strand 2
D
157 158anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
147 148first strand
Strand 2
D
153 154anti-parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
169 170first strand
Strand 2
D
219 220anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
313 314first strand
Strand 2
D
363 364anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
28 29first strand
Strand 2
E
32 33anti-parallel
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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
48 49first strand
Strand 2
E
97 99anti-parallel
Strand 3
E
102 105anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
108 109first strand
Strand 2
E
157 158anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
147 148first strand
Strand 2
E
153 154anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
169 170first strand
Strand 2
E
219 220anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
313 314first strand
Strand 2
E
363 364anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
28 29first strand
Strand 2
F
32 33anti-parallel
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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
48 49first strand
Strand 2
F
97 98anti-parallel
Strand 3
F
103 105anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
108 109first strand
Strand 2
F
157 158anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
147 148first strand
Strand 2
F
153 154anti-parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
169 170first strand
Strand 2
F
219 220anti-parallel
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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
313 314first strand
Strand 2
F
363 364anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il