Analysis of interatomic Contacts of Structural Units in PDB entry:
2RGY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RGY entry

There is 1 chain in PDB entry 2RGY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 85ARG 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2RGY. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
97 114Right-handed alpha
Helix 2
2
A
128 143Right-handed alpha
Helix 3
3
A
156 167Right-handed alpha
Helix 4
4
A
180 182Right-handed 310
Helix 5
5
A
188 203Right-handed alpha
Helix 6
6
A
217 233Right-handed alpha
Helix 7
7
A
237 241Right-handed 310
Helix 8
8
A
249 264Right-handed alpha
Helix 9
9
A
274 288Right-handed alpha
Helix 10
10
A
320 338Right-handed alpha
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There are 2 sheets in PDB entry 2RGY. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
117 121first strand
Strand 2
A
87 91parallel
Strand 3
A
147 150parallel
Strand 4
A
170 173parallel
Strand 5
A
184 185parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
243 245first strand
Strand 2
A
208 212parallel
Strand 3
A
269 272parallel
Strand 4
A
297 302parallel
Strand 5
A
315 318parallel
Strand 6
A
350 352anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il