Analysis of interatomic Contacts of Structural Units in PDB entry:
2RHS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RHS entry

There are 4 chains in PDB entry 2RHS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 87GLU 351
B
MET 1ARG 800
C
GLU 81GLU 351
D
MET 1ILE 799
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 2RHS. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
88 93Right-handed alpha
Helix 2
2
A
110 125Right-handed alpha
Helix 3
3
A
139 143Right-handed alpha
Helix 4
4
A
144 147Right-handed 310
Helix 5
5
A
152 156Right-handed 310
Helix 6
6
A
173 185Right-handed alpha
Helix 7
7
A
225 242Right-handed alpha
Helix 8
8
A
293 300Right-handed alpha
Helix 9
9
A
315 325Right-handed alpha
Helix 10
10
A
330 335Right-handed alpha
Helix 11
11
A
336 341Right-handed alpha
Helix 12
12
A
342 344Right-handed 310
Helix 13
13
B
5 10Right-handed alpha
Helix 14
14
B
17 28Right-handed alpha
Helix 15
15
B
122 126Right-handed 310
Helix 16
16
B
133 137Right-handed 310
Helix 17
17
B
152 157Right-handed alpha
Helix 18
18
B
169 176Right-handed 310
Helix 19
19
B
177 189Right-handed alpha
Helix 20
20
B
206 210Right-handed 310
Helix 21
21
B
238 247Right-handed alpha
Helix 22
22
B
254 268Right-handed alpha
Helix 23
23
B
277 279Right-handed 310
Helix 24
24
B
347 358Right-handed alpha
Helix 25
25
B
362 371Right-handed alpha
Helix 26
26
B
373 375Right-handed 310
Helix 27
27
B
376 393Right-handed alpha
Helix 28
28
B
417 425Right-handed alpha
Helix 29
29
B
429 440Right-handed alpha
Helix 30
30
B
465 477Right-handed alpha
Helix 31
31
B
478 481Right-handed 310
Helix 32
32
B
497 513Right-handed alpha
Helix 33
33
B
525 529Right-handed 310
Helix 34
34
B
547 550Right-handed 310
Helix 35
35
B
557 571Right-handed alpha
Helix 36
36
B
612 615Right-handed 310
Helix 37
37
B
621 637Right-handed alpha
Helix 38
38
B
672 679Right-handed alpha
Helix 39
39
B
691 697Right-handed alpha
Helix 40
40
B
726 738Right-handed alpha
Helix 41
41
B
777 795Right-handed alpha
Helix 42
42
C
82 93Right-handed alpha
Helix 43
43
C
110 125Right-handed alpha
Helix 44
44
C
139 143Right-handed alpha
Helix 45
45
C
144 147Right-handed 310
Helix 46
46
C
173 183Right-handed alpha
Helix 47
47
C
225 242Right-handed alpha
Helix 48
48
C
293 301Right-handed alpha
Helix 49
49
C
315 325Right-handed alpha
Helix 50
50
C
330 335Right-handed alpha
Helix 51
51
C
336 341Right-handed alpha
Helix 52
52
D
5 9Right-handed alpha
Helix 53
53
D
17 27Right-handed alpha
Helix 54
54
D
152 157Right-handed alpha
Helix 55
55
D
172 176Right-handed 310
Helix 56
56
D
177 189Right-handed alpha
Helix 57
57
D
208 210Right-handed 310
Helix 58
58
D
238 248Right-handed alpha
Helix 59
59
D
254 268Right-handed alpha
Helix 60
60
D
277 279Right-handed 310
Helix 61
61
D
347 358Right-handed alpha
Helix 62
62
D
364 371Right-handed alpha
Helix 63
63
D
373 375Right-handed 310
Helix 64
64
D
376 392Right-handed alpha
Helix 65
65
D
417 425Right-handed alpha
Helix 66
66
D
429 440Right-handed alpha
Helix 67
67
D
464 477Right-handed alpha
Helix 68
68
D
497 513Right-handed alpha
Helix 69
69
D
557 571Right-handed alpha
Helix 70
70
D
612 615Right-handed 310
Helix 71
71
D
621 637Right-handed alpha
Helix 72
72
D
672 679Right-handed alpha
Helix 73
73
D
691 697Right-handed alpha
Helix 74
74
D
726 737Right-handed alpha
Helix 75
75
D
777 795Right-handed alpha
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There are 29 sheets in PDB entry 2RHS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
129 130first strand
Strand 2
A
190 199parallel
Strand 3
A
211 221anti-parallel
Strand 4
A
308 314anti-parallel
Strand 5
A
284 292anti-parallel
Strand 6
A
257 265anti-parallel
Strand 7
A
247 254anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
136 138first strand
Strand 2
A
167 169anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2 4first strand
Strand 2
B
162 167anti-parallel
Strand 3
B
31 37anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
74 78first strand
Strand 2
B
64 68anti-parallel
Strand 3
B
43 54anti-parallel
Strand 4
B
89 99anti-parallel
Strand 5
B
103 104anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
74 78first strand
Strand 2
B
64 68anti-parallel
Strand 3
B
43 54anti-parallel
Strand 4
B
89 99anti-parallel
Strand 5
B
118 119anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
107 108first strand
Strand 2
B
115 116anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
212 215first strand
Strand 2
B
283 288parallel
Strand 3
B
310 313anti-parallel
Strand 4
B
318 321anti-parallel
Strand 5
B
325 326anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
271 275first strand
Strand 2
B
339 345anti-parallel
Strand 3
B
223 230anti-parallel
Strand 4
B
395 396anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
271 275first strand
Strand 2
B
339 345anti-parallel
Strand 3
B
223 230anti-parallel
Strand 4
B
401 403anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
293 296first strand
Strand 2
B
302 305anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
410 416first strand
Strand 2
B
450 456anti-parallel
Strand 3
B
443 447anti-parallel
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There are 7 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
516 517first strand
Strand 2
B
576 586parallel
Strand 3
B
595 605anti-parallel
Strand 4
B
684 690anti-parallel
Strand 5
B
663 671anti-parallel
Strand 6
B
650 660anti-parallel
Strand 7
B
640 644anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
523 524first strand
Strand 2
B
552 553anti-parallel
Strand 3
B
540 541anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
607 611first strand
Strand 2
B
616 619anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
713 722first strand
Strand 2
B
760 769anti-parallel
Strand 3
B
742 751anti-parallel
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There are 7 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
129 130first strand
Strand 2
C
190 199parallel
Strand 3
C
211 221anti-parallel
Strand 4
C
308 314anti-parallel
Strand 5
C
283 292anti-parallel
Strand 6
C
257 266anti-parallel
Strand 7
C
247 254anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
136 138first strand
Strand 2
C
167 169anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
2 4first strand
Strand 2
D
162 167anti-parallel
Strand 3
D
31 37anti-parallel
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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
75 79first strand
Strand 2
D
63 68anti-parallel
Strand 3
D
43 50anti-parallel
Strand 4
D
89 98anti-parallel
Strand 5
D
118 119anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
107 108first strand
Strand 2
D
115 116anti-parallel
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There are 5 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
202 206first strand
Strand 2
D
395 398parallel
Strand 3
D
224 230anti-parallel
Strand 4
D
338 342anti-parallel
Strand 5
D
272 275anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
202 206first strand
Strand 2
D
395 398parallel
Strand 3
D
224 230anti-parallel
Strand 4
D
401 403anti-parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
213 215first strand
Strand 2
D
284 288parallel
Strand 3
D
310 313anti-parallel
Strand 4
D
318 320anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
294 297first strand
Strand 2
D
301 304anti-parallel
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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
410 416first strand
Strand 2
D
450 456anti-parallel
Strand 3
D
443 447anti-parallel
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There are 7 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
516 517first strand
Strand 2
D
576 586parallel
Strand 3
D
595 605anti-parallel
Strand 4
D
684 690anti-parallel
Strand 5
D
663 671anti-parallel
Strand 6
D
650 660anti-parallel
Strand 7
D
640 644anti-parallel
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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
523 524first strand
Strand 2
D
552 553anti-parallel
Strand 3
D
540 541anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
607 611first strand
Strand 2
D
616 619anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
713 722first strand
Strand 2
D
760 769anti-parallel
Strand 3
D
742 751anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il