Analysis of interatomic Contacts of Structural Units in PDB entry:
2RJP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RJP entry

There are 4 chains in PDB entry 2RJP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 214HIS 508
B
 ALA 214HIS 508
C
 SER 215HIS 508
D
 SER 215CYS 506
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 2RJP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
227 235Right-handed alpha
Helix 2
2
A
237 253Right-handed alpha
Helix 3
3
A
254 259Right-handed 310
Helix 4
4
A
284 297Right-handed alpha
Helix 5
5
A
354 367Right-handed alpha
Helix 6
6
A
374 382Right-handed alpha
Helix 7
7
A
405 418Right-handed alpha
Helix 8
8
A
421 425Right-handed 310
Helix 9
9
A
438 443Right-handed alpha
Helix 10
10
A
444 454Right-handed alpha
Helix 11
11
B
227 235Right-handed alpha
Helix 12
12
B
237 253Right-handed alpha
Helix 13
13
B
254 259Right-handed 310
Helix 14
14
B
284 297Right-handed alpha
Helix 15
15
B
298 300Right-handed 310
Helix 16
16
B
354 367Right-handed alpha
Helix 17
17
B
374 382Right-handed alpha
Helix 18
18
B
405 418Right-handed alpha
Helix 19
19
B
421 425Right-handed 310
Helix 20
20
B
438 443Right-handed alpha
Helix 21
21
B
444 454Right-handed alpha
Helix 22
22
C
227 235Right-handed alpha
Helix 23
23
C
237 255Right-handed alpha
Helix 24
24
C
256 259Right-handed 310
Helix 25
25
C
284 300Right-handed alpha
Helix 26
26
C
354 367Right-handed alpha
Helix 27
27
C
374 382Right-handed alpha
Helix 28
28
C
405 418Right-handed alpha
Helix 29
29
C
421 425Right-handed 310
Helix 30
30
C
438 443Right-handed alpha
Helix 31
31
C
444 454Right-handed alpha
Helix 32
32
D
227 235Right-handed alpha
Helix 33
33
D
237 255Right-handed alpha
Helix 34
34
D
256 259Right-handed 310
Helix 35
35
D
284 297Right-handed alpha
Helix 36
36
D
298 300Right-handed 310
Helix 37
37
D
354 367Right-handed alpha
Helix 38
38
D
374 381Right-handed alpha
Helix 39
39
D
405 418Right-handed alpha
Helix 40
40
D
421 425Right-handed 310
Helix 41
41
D
438 443Right-handed alpha
Helix 42
42
D
444 454Right-handed alpha
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There are 11 sheets in PDB entry 2RJP. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 271first strand
Strand 2
A
218 226parallel
Strand 3
A
312 317parallel
Strand 4
A
345 349parallel
Strand 5
A
331 333anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
472 476first strand
Strand 2
A
479 483anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
494 496first strand
Strand 2
A
499 502anti-parallel
Strand 3
A
505 507anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 271first strand
Strand 2
B
218 226parallel
Strand 3
B
312 317parallel
Strand 4
B
345 349parallel
Strand 5
B
331 333anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
471 474first strand
Strand 2
B
481 484anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
500 502first strand
Strand 2
B
505 507anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
262 271first strand
Strand 2
C
218 226parallel
Strand 3
C
312 317parallel
Strand 4
C
345 349parallel
Strand 5
C
331 332anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
471 476first strand
Strand 2
C
479 484anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
494 496first strand
Strand 2
C
499 502anti-parallel
Strand 3
C
505 507anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
262 271first strand
Strand 2
D
218 226parallel
Strand 3
D
312 317parallel
Strand 4
D
345 349parallel
Strand 5
D
331 332anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
472 476first strand
Strand 2
D
479 483anti-parallel
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