Analysis of interatomic Contacts of Structural Units in PDB entry:
2RJQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RJQ entry

There is 1 chain in PDB entry 2RJQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 264ASP 555
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2RJQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
276 284Right-handed alpha
Helix 2
2
A
286 303Right-handed alpha
Helix 3
3
A
304 308Right-handed 310
Helix 4
4
A
333 348Right-handed alpha
Helix 5
5
A
389 392Right-handed 310
Helix 6
6
A
403 416Right-handed alpha
Helix 7
7
A
423 430Right-handed alpha
Helix 8
8
A
453 466Right-handed alpha
Helix 9
9
A
469 473Right-handed 310
Helix 10
10
A
486 491Right-handed alpha
Helix 11
11
A
492 502Right-handed alpha
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There are 3 sheets in PDB entry 2RJQ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 320first strand
Strand 2
A
267 275parallel
Strand 3
A
361 366parallel
Strand 4
A
394 398parallel
Strand 5
A
380 382anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 507first strand
Strand 2
A
519 523anti-parallel
Strand 3
A
526 530anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 549first strand
Strand 2
A
552 554anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il