Analysis of interatomic Contacts of Structural Units in PDB entry:
2RJZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RJZ entry

There are 2 chains in PDB entry 2RJZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 67ASN 201
B
 SER 67ASN 201
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2RJZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
67 75Right-handed alpha
Helix 2
2
A
76 79Right-handed 310
Helix 3
3
A
81 102Right-handed alpha
Helix 4
4
A
104 106Right-handed 310
Helix 5
5
A
107 123Right-handed alpha
Helix 6
6
A
153 166Right-handed alpha
Helix 7
7
B
67 75Right-handed alpha
Helix 8
8
B
76 79Right-handed 310
Helix 9
9
B
81 103Right-handed alpha
Helix 10
10
B
108 123Right-handed alpha
Helix 11
11
B
154 166Right-handed alpha
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There are 4 sheets in PDB entry 2RJZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 132first strand
Strand 2
A
141 152anti-parallel
Strand 3
A
136 137anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 132first strand
Strand 2
A
141 152anti-parallel
Strand 3
A
189 200anti-parallel
Strand 4
A
171 180anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 132first strand
Strand 2
B
141 153anti-parallel
Strand 3
B
136 137anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 132first strand
Strand 2
B
141 153anti-parallel
Strand 3
B
188 200anti-parallel
Strand 4
B
171 180anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il