Analysis of interatomic Contacts of Structural Units in PDB entry:
2RL0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2RL0 entry

There are 12 chains in PDB entry 2RL0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 153	ARG 241
G	GLY 638	THR 654
B	GLU 153	ARG 241
C	GLN 639	LYS 655
D	GLU 153	ARG 241
E	GLN 639	THR 654
F	GLU 153	ARG 241
H	GLN 639	LYS 655
I	GLU 153	GLU 240
J	VAL 640	GLU 652
K	GLU 153	ARG 241
L	GLN 639	LYS 655

There are no helices in PDB entry 2RL0

There are 20 sheets in PDB entry 2RL0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	157	first strand
Strand 2	A	162	165	anti-parallel

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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	174	first strand
Strand 2	A	178	186	anti-parallel
Strand 3	A	191	195	anti-parallel
Strand 4	G	640	651	anti-parallel
Strand 5	C	640	651	anti-parallel
Strand 6	B	191	195	anti-parallel
Strand 7	B	178	186	anti-parallel
Strand 8	B	169	174	anti-parallel

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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	218	first strand
Strand 2	A	224	231	anti-parallel
Strand 3	A	236	240	anti-parallel
Strand 4	G	640	651	anti-parallel
Strand 5	C	640	651	anti-parallel
Strand 6	B	236	240	anti-parallel
Strand 7	B	224	231	anti-parallel
Strand 8	B	214	218	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	202	first strand
Strand 2	A	207	210	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	157	first strand
Strand 2	B	162	165	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	202	first strand
Strand 2	B	207	210	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	154	157	first strand
Strand 2	D	162	165	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	174	first strand
Strand 2	D	178	186	anti-parallel
Strand 3	D	191	195	anti-parallel
Strand 4	E	648	652	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	200	202	first strand
Strand 2	D	207	209	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	214	218	first strand
Strand 2	D	224	231	anti-parallel
Strand 3	D	236	240	anti-parallel
Strand 4	E	640	644	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	154	157	first strand
Strand 2	F	162	165	anti-parallel

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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	174	first strand
Strand 2	F	178	186	anti-parallel
Strand 3	F	191	195	anti-parallel
Strand 4	H	640	651	anti-parallel
Strand 5	J	641	651	anti-parallel
Strand 6	I	192	195	anti-parallel
Strand 7	I	178	184	anti-parallel
Strand 8	I	169	174	anti-parallel

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There are 8 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	214	218	first strand
Strand 2	F	224	231	anti-parallel
Strand 3	F	236	240	anti-parallel
Strand 4	H	640	651	anti-parallel
Strand 5	J	641	651	anti-parallel
Strand 6	I	236	239	anti-parallel
Strand 7	I	227	231	anti-parallel
Strand 8	I	214	215	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	199	201	first strand
Strand 2	F	208	210	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	157	first strand
Strand 2	I	162	165	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	199	202	first strand
Strand 2	I	207	210	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	154	157	first strand
Strand 2	K	162	165	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	169	174	first strand
Strand 2	K	178	186	anti-parallel
Strand 3	K	191	195	anti-parallel
Strand 4	L	648	651	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	199	202	first strand
Strand 2	K	207	210	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	214	218	first strand
Strand 2	K	224	231	anti-parallel
Strand 3	K	236	240	anti-parallel
Strand 4	L	640	644	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2RL0

Analysis of interatomic Contacts of Structural Units in PDB entry:
2RL0