Analysis of interatomic Contacts of Structural Units in PDB entry:
2RMB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RMB entry

There are 30 chains in PDB entry 2RMB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 165
B
 VAL 9VAL 9
B
 ALA 11ALA 11
C
 MET 1GLU 165
D
 VAL 9VAL 9
D
 ALA 11ALA 11
E
 MET 1GLU 165
F
 VAL 9VAL 9
F
 ALA 11ALA 11
G
 MET 1GLU 165
H
 VAL 9VAL 9
H
 ALA 11ALA 11
I
 MET 1GLU 165
J
 VAL 9VAL 9
J
 ALA 11ALA 11
K
 MET 1GLU 165
L
 VAL 9VAL 9
L
 ALA 11ALA 11
M
 MET 1GLU 165
N
 VAL 9VAL 9
N
 ALA 11ALA 11
O
 MET 1GLU 165
P
 VAL 9VAL 9
P
 ALA 11ALA 11
Q
 MET 1GLU 165
R
 VAL 9VAL 9
R
 ALA 11ALA 11
S
 MET 1GLU 165
T
 VAL 9VAL 9
T
 ALA 11ALA 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 2RMB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 42Right-handed alpha
Helix 2
2
A
119 123Right-handed 310
Helix 3
3
A
135 144Right-handed alpha
Helix 4
4
C
29 42Right-handed alpha
Helix 5
5
C
119 123Right-handed 310
Helix 6
6
C
135 144Right-handed alpha
Helix 7
7
E
29 42Right-handed alpha
Helix 8
8
E
119 123Right-handed 310
Helix 9
9
E
135 144Right-handed alpha
Helix 10
10
G
29 42Right-handed alpha
Helix 11
11
G
119 123Right-handed 310
Helix 12
12
G
135 144Right-handed alpha
Helix 13
13
I
29 42Right-handed alpha
Helix 14
14
I
119 123Right-handed 310
Helix 15
15
I
135 144Right-handed alpha
Helix 16
16
K
29 42Right-handed alpha
Helix 17
17
K
119 123Right-handed 310
Helix 18
18
K
135 144Right-handed alpha
Helix 19
19
M
29 42Right-handed alpha
Helix 20
20
M
119 123Right-handed 310
Helix 21
21
M
135 144Right-handed alpha
Helix 22
22
O
29 42Right-handed alpha
Helix 23
23
O
119 123Right-handed 310
Helix 24
24
O
135 144Right-handed alpha
Helix 25
25
Q
29 42Right-handed alpha
Helix 26
26
Q
119 123Right-handed 310
Helix 27
27
Q
135 144Right-handed alpha
Helix 28
28
S
29 42Right-handed alpha
Helix 29
29
S
119 123Right-handed 310
Helix 30
30
S
135 144Right-handed alpha
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There are 10 sheets in PDB entry 2RMB. Click on sheet of interest to get list of strands forming it: AA, CA, EA, GA, IA, KA, MA, OA, QA, SA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 57first strand
Strand 2
A
61 64anti-parallel
Strand 3
A
112 115anti-parallel
Strand 4
A
97 100anti-parallel
Strand 5
A
128 134anti-parallel
Strand 6
A
15 24anti-parallel
Strand 7
A
5 12anti-parallel
Strand 8
A
156 163anti-parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
55 57first strand
Strand 2
C
61 64anti-parallel
Strand 3
C
112 115anti-parallel
Strand 4
C
97 100anti-parallel
Strand 5
C
128 132anti-parallel
Strand 6
C
15 24anti-parallel
Strand 7
C
5 12anti-parallel
Strand 8
C
156 163anti-parallel
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There are 8 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
55 57first strand
Strand 2
E
61 64anti-parallel
Strand 3
E
112 115anti-parallel
Strand 4
E
97 100anti-parallel
Strand 5
E
128 134anti-parallel
Strand 6
E
15 24anti-parallel
Strand 7
E
5 12anti-parallel
Strand 8
E
156 163anti-parallel
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There are 8 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
55 57first strand
Strand 2
G
61 64anti-parallel
Strand 3
G
112 115anti-parallel
Strand 4
G
97 100anti-parallel
Strand 5
G
128 134anti-parallel
Strand 6
G
15 24anti-parallel
Strand 7
G
5 12anti-parallel
Strand 8
G
156 163anti-parallel
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There are 8 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
55 57first strand
Strand 2
I
61 64anti-parallel
Strand 3
I
112 115anti-parallel
Strand 4
I
97 100anti-parallel
Strand 5
I
128 134anti-parallel
Strand 6
I
15 24anti-parallel
Strand 7
I
5 12anti-parallel
Strand 8
I
156 163anti-parallel
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There are 8 strands in KA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
55 57first strand
Strand 2
K
61 64anti-parallel
Strand 3
K
112 115anti-parallel
Strand 4
K
97 100anti-parallel
Strand 5
K
128 134anti-parallel
Strand 6
K
15 24anti-parallel
Strand 7
K
5 12anti-parallel
Strand 8
K
156 163anti-parallel
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There are 8 strands in MA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
55 57first strand
Strand 2
M
61 64anti-parallel
Strand 3
M
112 115anti-parallel
Strand 4
M
97 100anti-parallel
Strand 5
M
128 132anti-parallel
Strand 6
M
16 24anti-parallel
Strand 7
M
5 12anti-parallel
Strand 8
M
156 163anti-parallel
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There are 8 strands in OA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
55 57first strand
Strand 2
O
61 64anti-parallel
Strand 3
O
112 115anti-parallel
Strand 4
O
97 100anti-parallel
Strand 5
O
128 134anti-parallel
Strand 6
O
15 24anti-parallel
Strand 7
O
5 12anti-parallel
Strand 8
O
156 163anti-parallel
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There are 8 strands in QA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
55 57first strand
Strand 2
Q
61 64anti-parallel
Strand 3
Q
112 115anti-parallel
Strand 4
Q
97 100anti-parallel
Strand 5
Q
128 132anti-parallel
Strand 6
Q
15 24anti-parallel
Strand 7
Q
5 12anti-parallel
Strand 8
Q
156 163anti-parallel
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There are 8 strands in SA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
55 57first strand
Strand 2
S
61 64anti-parallel
Strand 3
S
112 115anti-parallel
Strand 4
S
97 100anti-parallel
Strand 5
S
128 134anti-parallel
Strand 6
S
15 24anti-parallel
Strand 7
S
5 12anti-parallel
Strand 8
S
156 163anti-parallel
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