Analysis of interatomic Contacts of Structural Units in PDB entry:
2RMP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RMP entry

There are 3 chains in PDB entry 2RMP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4GLU 361
B
 VAL 701VAL 702
B
 ALA 704ALA 704
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2RMP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
HN1
A
53 56Right-handed 310
Helix 2
HN2
A
65 67Right-handed 310
Helix 3
HN3
A
117 120Right-handed alpha
Helix 4
HN4
A
138 141Right-handed 310
Helix 5
HN5
A
142 147Right-handed alpha
Helix 6
HN6
A
154 160Right-handed alpha
Helix 7
HC1
A
189 191Right-handed 310
Helix 8
HC2
A
247 257Right-handed alpha
Helix 9
HC3
A
274 276Right-handed 310
Helix 10
HC4
A
302 305Right-handed 310
Helix 11
HC5
A
332 335Right-handed alpha
Helix 12
HC6
A
356 358Right-handed 310
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There are 7 sheets in PDB entry 2RMP. Click on sheet of interest to get list of strands forming it: 1N, 2N, 3N, 1C, 2C, 3C, A,

There are 8 strands in 1N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 14first strand
Strand 2
A
18 23anti-parallel
Strand 3
A
34 38anti-parallel
Strand 4
A
131 134parallel
Strand 5
A
43 47anti-parallel
Strand 6
A
106 111parallel
Strand 7
A
90 93anti-parallel
Strand 8
A
72 73anti-parallel
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There are 3 strands in 2N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 81first strand
Strand 2
A
86 90anti-parallel
Strand 3
A
112 115anti-parallel
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There are 4 strands in 3N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
22 26anti-parallel
Strand 3
A
95 98anti-parallel
Strand 4
A
101 105anti-parallel
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There are 5 strands in 1C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 215first strand
Strand 2
A
232 235anti-parallel
Strand 3
A
329 330parallel
Strand 4
A
243 245anti-parallel
Strand 5
A
320 322parallel
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There are 4 strands in 2C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 309first strand
Strand 2
A
315 318anti-parallel
Strand 3
A
267 271anti-parallel
Strand 4
A
262 264anti-parallel
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There are 4 strands in 3C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 227first strand
Strand 2
A
216 220anti-parallel
Strand 3
A
281 287anti-parallel
Strand 4
A
294 301anti-parallel
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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
178 184anti-parallel
Strand 3
A
169 174anti-parallel
Strand 4
A
338 343anti-parallel
Strand 5
A
348 353anti-parallel
Strand 6
A
197 200anti-parallel
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