Analysis of interatomic Contacts of Structural Units in PDB entry:
2ROM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ROM entry

There is 1 chain in PDB entry 2ROM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5PHE 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2ROM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
A
A
21 28Right-handed alpha
Helix 2
B
A
48 56Right-handed alpha
Helix 3
B'
A
74 79Right-handed alpha
Helix 4
31A
A
86 88Right-handed 310
Helix 5
C
A
93 101Right-handed alpha
Helix 6
31B
A
102 105Right-handed 310
Helix 7
D'
A
107 112Right-handed alpha
Helix 8
D
A
114 131Right-handed alpha
Helix 9
E'
A
140 143Right-handed alpha
Helix 10
E
A
147 157Right-handed alpha
Helix 11
31C
A
161 163Right-handed 310
Helix 12
F
A
164 174Right-handed alpha
Helix 13
G
A
181 204Right-handed alpha
Helix 14
H
A
210 217Right-handed alpha
Helix 15
I'
A
226 238Right-handed alpha
Helix 16
I
A
241 257Right-handed alpha
Helix 17
J
A
259 267Right-handed alpha
Helix 18
31D
A
269 271Right-handed 310
Helix 19
K
A
272 282Right-handed alpha
Helix 20
K2
A
315 318Right-handed alpha
Helix 21
31E
A
348 350Right-handed 310
Helix 22
L
A
355 366Right-handed alpha
Helix 23
L'
A
369 372Right-handed alpha
Helix 24
31F
A
382 384Right-handed 310
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There are 4 sheets in PDB entry 2ROM. Click on sheet of interest to get list of strands forming it: S1, S2, S3, S4,

There are 2 strands in S1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 14first strand
Strand 2
A
17 19anti-parallel
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There are 5 strands in S2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
41 45anti-parallel
Strand 3
A
310 313parallel
Strand 4
A
291 294anti-parallel
Strand 5
A
60 61anti-parallel
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There are 3 strands in S3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
400 402anti-parallel
Strand 3
A
377 378anti-parallel
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There are 2 strands in S4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 387first strand
Strand 2
A
396 398anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il