Analysis of interatomic Contacts of Structural Units in PDB entry:
2RUI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RUI entry

There are 2 chains in PDB entry 2RUI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 53LYS 210
B
 LEU 702ALA 704
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2RUI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 72Right-handed alpha
Helix 2
2
A
75 77Right-handed 310
Helix 3
3
A
86 89Right-handed 310
Helix 4
4
A
101 106Right-handed 310
Helix 5
5
A
137 141Right-handed 310
Helix 6
6
A
170 175Right-handed 310
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There is 1 sheet ( A) in PDB entry 2RUI.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 85first strand
Strand 2
A
90 95anti-parallel
Strand 3
A
108 109parallel
Strand 4
A
120 124anti-parallel
Strand 5
A
181 185parallel
Strand 6
A
196 208anti-parallel
Strand 7
A
154 166anti-parallel
Strand 8
A
146 151anti-parallel
Strand 9
A
79 85anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il