Analysis of interatomic Contacts of Structural Units in PDB entry:
2RUJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RUJ entry

There are 10 chains in PDB entry 2RUJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 241ALA 279
A
 PHE 281PHE 281
A
 GLY 283LEU 290
A
 LEU 292GLU 300
A
 PRO 302ARG 311
A
 ASN 313GLN 331
A
 VAL 333LEU 370
A
 LYS 372ALA 383
A
 PRO 385ALA 393
A
 TYR 395LYS 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 2RUJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
278 282Right-handed 310
Helix 2
2
A
316 331Right-handed alpha
Helix 3
3
A
337 341Right-handed 310
Helix 4
4
A
370 374Right-handed 310
Helix 5
5
A
384 395Right-handed alpha
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There are 2 sheets in PDB entry 2RUJ. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 292first strand
Strand 2
A
308 310anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 295first strand
Strand 2
A
378 382parallel
Strand 3
A
346 351anti-parallel
Strand 4
A
357 363anti-parallel
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