Analysis of interatomic Contacts of Structural Units in PDB entry:
2SBL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2SBL entry

There are 2 chains in PDB entry 2SBL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
LYS 7ILE 839
A
LYS 7ILE 839
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 46 helices in PDB entry 2SBL. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
B1
B
156 170Right-handed alpha
Helix 2
B2
B
255 276Right-handed alpha
Helix 3
B3
B
286 295Right-handed alpha
Helix 4
B4
B
301 308Right-handed alpha
Helix 5
B5
B
312 316Right-handed alpha
Helix 6
B6
B
342 352Right-handed alpha
Helix 7
B7
B
395 401Right-handed alpha
Helix 8
B8
B
410 423Right-handed alpha
Helix 9
B9
B
474 516Right-handed alpha
Helix 10
B10
B
523 531Right-handed alpha
Helix 11
B11
B
534 546Right-handed alpha
Helix 12
B12
B
552 556Right-handed alpha
Helix 13
B13
B
560 573Right-handed alpha
Helix 14
B14
B
581 588Right-handed alpha
Helix 15
B15
B
610 633Right-handed alpha
Helix 16
B16
B
636 641Right-handed alpha
Helix 17
B17
B
643 656Right-handed alpha
Helix 18
B18
B
672 701Right-handed alpha
Helix 19
B19
B
721 728Right-handed alpha
Helix 20
B20
B
730 737Right-handed alpha
Helix 21
B21
B
741 755Right-handed alpha
Helix 22
B22
B
776 800Right-handed alpha
Helix 23
B23
B
804 808Right-handed alpha
Helix 24
A1
A
156 170Right-handed alpha
Helix 25
A2
A
255 276Right-handed alpha
Helix 26
A3
A
286 295Right-handed alpha
Helix 27
A4
A
301 308Right-handed alpha
Helix 28
A5
A
312 316Right-handed alpha
Helix 29
A6
A
342 352Right-handed alpha
Helix 30
A7
A
395 401Right-handed alpha
Helix 31
A8
A
410 423Right-handed alpha
Helix 32
A9
A
474 516Right-handed alpha
Helix 33
A10
A
523 531Right-handed alpha
Helix 34
A11
A
534 546Right-handed alpha
Helix 35
A12
A
552 556Right-handed alpha
Helix 36
A13
A
560 573Right-handed alpha
Helix 37
A14
A
581 588Right-handed alpha
Helix 38
A15
A
610 633Right-handed alpha
Helix 39
A16
A
636 641Right-handed alpha
Helix 40
A17
A
643 656Right-handed alpha
Helix 41
A18
A
672 701Right-handed alpha
Helix 42
A19
A
721 728Right-handed alpha
Helix 43
A20
A
730 737Right-handed alpha
Helix 44
A21
A
741 755Right-handed alpha
Helix 45
A22
A
776 800Right-handed alpha
Helix 46
A23
A
804 808Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 2SBL. Click on sheet of interest to get list of strands forming it: B1B, B2B, B3B, B1A, B2A, B3A,

There are 8 strands in B1B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
7 15first strand
Strand 2
B
40 48anti-parallel
Strand 3
B
57 65anti-parallel
Strand 4
B
78 85anti-parallel
Strand 5
B
95 102anti-parallel
Strand 6
B
106 114anti-parallel
Strand 7
B
123 131anti-parallel
Strand 8
B
141 145anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B2B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
296 299first strand
Strand 2
B
317 320anti-parallel
Strand 3
B
323 327anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B3B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
359 362first strand
Strand 2
B
403 408anti-parallel
Strand 3
B
430 437anti-parallel
Strand 4
B
442 453anti-parallel
Strand 5
B
461 468anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B1A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
7 15first strand
Strand 2
A
40 48anti-parallel
Strand 3
A
57 65anti-parallel
Strand 4
A
78 85anti-parallel
Strand 5
A
95 102anti-parallel
Strand 6
A
106 114anti-parallel
Strand 7
A
123 131anti-parallel
Strand 8
A
141 145anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B2A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
296 299first strand
Strand 2
A
317 320anti-parallel
Strand 3
A
323 327anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B3A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
359 362first strand
Strand 2
A
403 408anti-parallel
Strand 3
A
430 437anti-parallel
Strand 4
A
442 453anti-parallel
Strand 5
A
461 468anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il