Analysis of interatomic Contacts of Structural Units in PDB entry:
2UUV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2UUV entry

There are 4 chains in PDB entry 2UUV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 12	ARG 584
B	HIS 12	ARG 584
C	HIS 12	ARG 584
D	HIS 12	ARG 584

There are 94 helices in PDB entry 2UUV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	14	19	Right-handed alpha
Helix 2	2	A	54	63	Right-handed alpha
Helix 3	3	A	82	86	Right-handed 310
Helix 4	4	A	94	103	Right-handed alpha
Helix 5	5	A	106	108	Right-handed 310
Helix 6	6	A	113	119	Right-handed alpha
Helix 7	7	A	125	134	Right-handed alpha
Helix 8	8	A	149	164	Right-handed alpha
Helix 9	9	A	195	197	Right-handed 310
Helix 10	10	A	217	227	Right-handed alpha
Helix 11	11	A	238	242	Right-handed 310
Helix 12	12	A	243	251	Right-handed alpha
Helix 13	13	A	256	261	Right-handed alpha
Helix 14	14	A	262	266	Right-handed alpha
Helix 15	15	A	293	298	Right-handed alpha
Helix 16	16	A	330	344	Right-handed alpha
Helix 17	17	A	355	365	Right-handed alpha
Helix 18	18	A	376	387	Right-handed alpha
Helix 19	19	A	405	423	Right-handed alpha
Helix 20	20	A	434	438	Right-handed 310
Helix 21	21	A	439	441	Right-handed 310
Helix 22	22	A	442	452	Right-handed alpha
Helix 23	23	A	466	486	Right-handed alpha
Helix 24	24	A	524	538	Right-handed alpha
Helix 25	25	A	563	576	Right-handed alpha
Helix 26	26	B	14	19	Right-handed alpha
Helix 27	27	B	54	63	Right-handed alpha
Helix 28	28	B	82	86	Right-handed 310
Helix 29	29	B	94	103	Right-handed alpha
Helix 30	30	B	106	108	Right-handed 310
Helix 31	31	B	113	119	Right-handed alpha
Helix 32	32	B	125	134	Right-handed alpha
Helix 33	33	B	149	164	Right-handed alpha
Helix 34	34	B	217	228	Right-handed alpha
Helix 35	35	B	238	242	Right-handed 310
Helix 36	36	B	243	251	Right-handed alpha
Helix 37	37	B	256	261	Right-handed alpha
Helix 38	38	B	262	266	Right-handed alpha
Helix 39	39	B	293	298	Right-handed alpha
Helix 40	40	B	330	345	Right-handed alpha
Helix 41	41	B	355	365	Right-handed alpha
Helix 42	42	B	377	390	Right-handed alpha
Helix 43	43	B	405	423	Right-handed alpha
Helix 44	44	B	439	441	Right-handed 310
Helix 45	45	B	442	452	Right-handed alpha
Helix 46	46	B	466	486	Right-handed alpha
Helix 47	47	B	526	537	Right-handed alpha
Helix 48	48	B	563	576	Right-handed alpha
Helix 49	49	C	14	19	Right-handed alpha
Helix 50	50	C	52	61	Right-handed alpha
Helix 51	51	C	82	86	Right-handed 310
Helix 52	52	C	94	105	Right-handed alpha
Helix 53	53	C	106	108	Right-handed 310
Helix 54	54	C	113	120	Right-handed alpha
Helix 55	55	C	125	134	Right-handed alpha
Helix 56	56	C	149	164	Right-handed alpha
Helix 57	57	C	217	227	Right-handed alpha
Helix 58	58	C	238	242	Right-handed 310
Helix 59	59	C	243	251	Right-handed alpha
Helix 60	60	C	256	261	Right-handed alpha
Helix 61	61	C	262	266	Right-handed alpha
Helix 62	62	C	293	298	Right-handed alpha
Helix 63	63	C	330	344	Right-handed alpha
Helix 64	64	C	355	364	Right-handed alpha
Helix 65	65	C	379	387	Right-handed alpha
Helix 66	66	C	405	422	Right-handed alpha
Helix 67	67	C	434	441	Right-handed 310
Helix 68	68	C	442	453	Right-handed alpha
Helix 69	69	C	466	483	Right-handed alpha
Helix 70	70	C	563	576	Right-handed alpha
Helix 71	71	D	14	19	Right-handed alpha
Helix 72	72	D	54	63	Right-handed alpha
Helix 73	73	D	82	86	Right-handed 310
Helix 74	74	D	94	105	Right-handed alpha
Helix 75	75	D	106	108	Right-handed 310
Helix 76	76	D	113	120	Right-handed alpha
Helix 77	77	D	125	134	Right-handed alpha
Helix 78	78	D	149	164	Right-handed alpha
Helix 79	79	D	217	227	Right-handed alpha
Helix 80	80	D	238	242	Right-handed 310
Helix 81	81	D	243	251	Right-handed alpha
Helix 82	82	D	256	261	Right-handed alpha
Helix 83	83	D	262	266	Right-handed alpha
Helix 84	84	D	293	298	Right-handed alpha
Helix 85	85	D	330	345	Right-handed alpha
Helix 86	86	D	355	366	Right-handed alpha
Helix 87	87	D	376	387	Right-handed alpha
Helix 88	88	D	405	423	Right-handed alpha
Helix 89	89	D	432	435	Right-handed 310
Helix 90	90	D	436	442	Right-handed alpha
Helix 91	91	D	442	452	Right-handed alpha
Helix 92	92	D	466	486	Right-handed alpha
Helix 93	93	D	527	537	Right-handed alpha
Helix 94	94	D	563	576	Right-handed alpha

There are 20 sheets in PDB entry 2UUV. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE, CA, CB, CC, CD, CE, A, DB, C, DD, DE,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	33	first strand
Strand 2	A	40	43	anti-parallel
Strand 3	A	50	51	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	A	143	145	anti-parallel
Strand 3	A	189	193	parallel
Strand 4	A	166	170	parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	200	204	first strand
Strand 2	A	209	213	anti-parallel
Strand 3	A	306	313	anti-parallel
Strand 4	A	267	274	anti-parallel
Strand 5	A	277	279	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	231	first strand
Strand 2	A	315	316	anti-parallel

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There are 7 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	426	430	first strand
Strand 2	A	320	328	anti-parallel
Strand 3	A	396	404	anti-parallel
Strand 4	A	350	354	anti-parallel
Strand 5	A	491	501	anti-parallel
Strand 6	A	504	514	anti-parallel
Strand 7	A	455	465	anti-parallel

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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	34	first strand
Strand 2	B	39	43	anti-parallel
Strand 3	B	50	51	anti-parallel

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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	111	first strand
Strand 2	B	143	145	anti-parallel
Strand 3	B	189	193	parallel
Strand 4	B	166	170	parallel

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There are 5 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	200	204	first strand
Strand 2	B	209	213	anti-parallel
Strand 3	B	306	313	anti-parallel
Strand 4	B	267	274	anti-parallel
Strand 5	B	277	279	anti-parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	230	231	first strand
Strand 2	B	315	316	anti-parallel

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There are 7 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	426	430	first strand
Strand 2	B	320	328	anti-parallel
Strand 3	B	396	404	anti-parallel
Strand 4	B	350	354	anti-parallel
Strand 5	B	491	501	anti-parallel
Strand 6	B	504	514	anti-parallel
Strand 7	B	455	465	anti-parallel

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There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	33	first strand
Strand 2	C	40	43	anti-parallel
Strand 3	C	50	51	anti-parallel

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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	111	first strand
Strand 2	C	143	145	anti-parallel
Strand 3	C	189	193	parallel
Strand 4	C	166	170	parallel

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There are 5 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	200	204	first strand
Strand 2	C	209	213	anti-parallel
Strand 3	C	306	313	anti-parallel
Strand 4	C	267	274	anti-parallel
Strand 5	C	277	279	anti-parallel

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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	230	231	first strand
Strand 2	C	315	316	anti-parallel

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There are 7 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	426	431	first strand
Strand 2	C	320	328	anti-parallel
Strand 3	C	396	404	anti-parallel
Strand 4	C	350	354	anti-parallel
Strand 5	C	491	501	anti-parallel
Strand 6	C	504	514	anti-parallel
Strand 7	C	455	465	anti-parallel

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There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	33	first strand
Strand 2	D	40	43	anti-parallel
Strand 3	D	50	51	anti-parallel

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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	111	first strand
Strand 2	D	143	145	anti-parallel
Strand 3	D	189	193	parallel
Strand 4	D	166	170	parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	200	204	first strand
Strand 2	D	209	213	anti-parallel
Strand 3	D	306	313	anti-parallel
Strand 4	D	267	274	anti-parallel
Strand 5	D	277	279	anti-parallel

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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	231	first strand
Strand 2	D	315	316	anti-parallel

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There are 7 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	426	431	first strand
Strand 2	D	320	328	anti-parallel
Strand 3	D	396	404	anti-parallel
Strand 4	D	350	354	anti-parallel
Strand 5	D	491	501	anti-parallel
Strand 6	D	504	514	anti-parallel
Strand 7	D	455	465	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2UUV

Analysis of interatomic Contacts of Structural Units in PDB entry:
2UUV