Analysis of interatomic Contacts of Structural Units in PDB entry:
2UVD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2UVD entry

There are 8 chains in PDB entry 2UVD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 246
B
 MET 1MET 246
C
 MET 1MET 246
D
 MET 1MET 246
E
 MET 1MET 246
F
 MET 1MET 246
G
 MET 1MET 246
H
 MET 1MET 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 91 helices in PDB entry 2UVD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
38 52Right-handed alpha
Helix 3
3
A
65 81Right-handed alpha
Helix 4
4
A
97 101Right-handed 310
Helix 5
5
A
102 114Right-handed alpha
Helix 6
6
A
114 132Right-handed alpha
Helix 7
7
A
142 147Right-handed alpha
Helix 8
8
A
151 173Right-handed alpha
Helix 9
9
A
188 191Right-handed 310
Helix 10
10
A
198 206Right-handed alpha
Helix 11
11
A
214 227Right-handed alpha
Helix 12
12
A
228 231Right-handed 310
Helix 13
13
B
14 27Right-handed alpha
Helix 14
14
B
39 52Right-handed alpha
Helix 15
15
B
65 81Right-handed alpha
Helix 16
16
B
102 114Right-handed alpha
Helix 17
17
B
114 132Right-handed alpha
Helix 18
18
B
142 147Right-handed alpha
Helix 19
19
B
151 173Right-handed alpha
Helix 20
20
B
188 191Right-handed 310
Helix 21
21
B
196 206Right-handed alpha
Helix 22
22
B
214 227Right-handed alpha
Helix 23
23
B
228 231Right-handed 310
Helix 24
24
C
14 27Right-handed alpha
Helix 25
25
C
38 52Right-handed alpha
Helix 26
26
C
65 81Right-handed alpha
Helix 27
27
C
97 101Right-handed 310
Helix 28
28
C
102 114Right-handed alpha
Helix 29
29
C
114 132Right-handed alpha
Helix 30
30
C
142 147Right-handed alpha
Helix 31
31
C
151 173Right-handed alpha
Helix 32
32
C
188 192Right-handed 310
Helix 33
33
C
196 206Right-handed alpha
Helix 34
34
C
214 227Right-handed alpha
Helix 35
35
C
228 231Right-handed 310
Helix 36
36
D
14 27Right-handed alpha
Helix 37
37
D
38 52Right-handed alpha
Helix 38
38
D
65 81Right-handed alpha
Helix 39
39
D
102 114Right-handed alpha
Helix 40
40
D
114 132Right-handed alpha
Helix 41
41
D
142 147Right-handed alpha
Helix 42
42
D
151 173Right-handed alpha
Helix 43
43
D
188 192Right-handed 310
Helix 44
44
D
196 206Right-handed alpha
Helix 45
45
D
214 227Right-handed alpha
Helix 46
46
D
228 231Right-handed 310
Helix 47
47
E
14 27Right-handed alpha
Helix 48
48
E
38 52Right-handed alpha
Helix 49
49
E
65 81Right-handed alpha
Helix 50
50
E
97 101Right-handed 310
Helix 51
51
E
102 114Right-handed alpha
Helix 52
52
E
114 132Right-handed alpha
Helix 53
53
E
142 147Right-handed alpha
Helix 54
54
E
151 173Right-handed alpha
Helix 55
55
E
188 191Right-handed 310
Helix 56
56
E
196 206Right-handed alpha
Helix 57
57
E
214 227Right-handed alpha
Helix 58
58
E
228 231Right-handed 310
Helix 59
59
F
14 27Right-handed alpha
Helix 60
60
F
39 52Right-handed alpha
Helix 61
61
F
65 81Right-handed alpha
Helix 62
62
F
102 114Right-handed alpha
Helix 63
63
F
114 132Right-handed alpha
Helix 64
64
F
142 147Right-handed alpha
Helix 65
65
F
151 173Right-handed alpha
Helix 66
66
F
188 192Right-handed 310
Helix 67
67
F
196 206Right-handed alpha
Helix 68
68
F
214 227Right-handed alpha
Helix 69
69
F
228 231Right-handed 310
Helix 70
70
G
14 27Right-handed alpha
Helix 71
71
G
38 52Right-handed alpha
Helix 72
72
G
65 81Right-handed alpha
Helix 73
73
G
102 114Right-handed alpha
Helix 74
74
G
114 132Right-handed alpha
Helix 75
75
G
142 147Right-handed alpha
Helix 76
76
G
151 173Right-handed alpha
Helix 77
77
G
196 206Right-handed alpha
Helix 78
78
G
214 227Right-handed alpha
Helix 79
79
G
228 231Right-handed 310
Helix 80
80
H
14 27Right-handed alpha
Helix 81
81
H
38 52Right-handed alpha
Helix 82
82
H
65 81Right-handed alpha
Helix 83
83
H
97 101Right-handed 310
Helix 84
84
H
102 114Right-handed alpha
Helix 85
85
H
114 132Right-handed alpha
Helix 86
86
H
142 147Right-handed alpha
Helix 87
87
H
151 173Right-handed alpha
Helix 88
88
H
188 192Right-handed 310
Helix 89
89
H
196 206Right-handed alpha
Helix 90
90
H
214 227Right-handed alpha
Helix 91
91
H
228 231Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 2UVD. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA, GA, HA,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 60first strand
Strand 2
A
30 35parallel
Strand 3
A
6 9parallel
Strand 4
A
85 88parallel
Strand 5
A
134 139parallel
Strand 6
A
177 184parallel
Strand 7
A
237 240parallel
Back to list of sheets
Back to top of page

There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 60first strand
Strand 2
B
30 35parallel
Strand 3
B
6 9parallel
Strand 4
B
85 88parallel
Strand 5
B
134 139parallel
Strand 6
B
177 184parallel
Strand 7
B
237 240parallel
Back to list of sheets
Back to top of page

There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 60first strand
Strand 2
C
30 35parallel
Strand 3
C
6 9parallel
Strand 4
C
85 88parallel
Strand 5
C
134 139parallel
Strand 6
C
177 184parallel
Strand 7
C
237 240parallel
Back to list of sheets
Back to top of page

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 60first strand
Strand 2
D
30 35parallel
Strand 3
D
6 9parallel
Strand 4
D
85 88parallel
Strand 5
D
134 139parallel
Strand 6
D
177 184parallel
Strand 7
D
237 240parallel
Back to list of sheets
Back to top of page

There are 7 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
56 60first strand
Strand 2
E
30 35parallel
Strand 3
E
6 9parallel
Strand 4
E
85 88parallel
Strand 5
E
134 139parallel
Strand 6
E
177 184parallel
Strand 7
E
237 240parallel
Back to list of sheets
Back to top of page

There are 7 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
56 60first strand
Strand 2
F
30 35parallel
Strand 3
F
6 9parallel
Strand 4
F
85 88parallel
Strand 5
F
134 139parallel
Strand 6
F
177 184parallel
Strand 7
F
237 240parallel
Back to list of sheets
Back to top of page

There are 7 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
56 60first strand
Strand 2
G
30 35parallel
Strand 3
G
6 9parallel
Strand 4
G
85 88parallel
Strand 5
G
134 139parallel
Strand 6
G
177 184parallel
Strand 7
G
237 240parallel
Back to list of sheets
Back to top of page

There are 7 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
56 60first strand
Strand 2
H
30 35parallel
Strand 3
H
6 9parallel
Strand 4
H
85 88parallel
Strand 5
H
134 139parallel
Strand 6
H
177 184parallel
Strand 7
H
237 240parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il