Analysis of interatomic Contacts of Structural Units in PDB entry:
2UVN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2UVN entry

There are 2 chains in PDB entry 2UVN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 6ARG 407
B
 HIS 7SER 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 2UVN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 31Right-handed alpha
Helix 2
2
A
41 44Right-handed 310
Helix 3
3
A
51 61Right-handed alpha
Helix 4
4
A
97 105Right-handed alpha
Helix 5
5
A
106 108Right-handed 310
Helix 6
6
A
109 115Right-handed alpha
Helix 7
7
A
116 134Right-handed alpha
Helix 8
8
A
139 143Right-handed alpha
Helix 9
9
A
145 157Right-handed alpha
Helix 10
10
A
159 175Right-handed alpha
Helix 11
11
A
183 205Right-handed alpha
Helix 12
12
A
211 219Right-handed alpha
Helix 13
13
A
226 261Right-handed alpha
Helix 14
14
A
262 272Right-handed alpha
Helix 15
15
A
275 288Right-handed alpha
Helix 16
16
A
317 322Right-handed alpha
Helix 17
17
A
324 329Right-handed alpha
Helix 18
18
A
356 375Right-handed alpha
Helix 19
19
A
382 385Right-handed 310
Helix 20
20
B
20 31Right-handed alpha
Helix 21
21
B
41 44Right-handed 310
Helix 22
22
B
51 61Right-handed alpha
Helix 23
23
B
95 105Right-handed alpha
Helix 24
24
B
106 108Right-handed 310
Helix 25
25
B
109 133Right-handed alpha
Helix 26
26
B
139 143Right-handed alpha
Helix 27
27
B
146 157Right-handed alpha
Helix 28
28
B
159 174Right-handed alpha
Helix 29
29
B
185 205Right-handed alpha
Helix 30
30
B
211 219Right-handed alpha
Helix 31
31
B
228 262Right-handed alpha
Helix 32
32
B
262 272Right-handed alpha
Helix 33
33
B
275 288Right-handed alpha
Helix 34
34
B
317 322Right-handed alpha
Helix 35
35
B
324 329Right-handed alpha
Helix 36
36
B
330 334Right-handed 310
Helix 37
37
B
349 353Right-handed 310
Helix 38
38
B
356 375Right-handed alpha
Helix 39
39
B
382 385Right-handed 310
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There are 8 sheets in PDB entry 2UVN. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 36first strand
Strand 2
A
46 49anti-parallel
Strand 3
A
313 316parallel
Strand 4
A
293 297anti-parallel
Strand 5
A
65 66anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
400 403anti-parallel
Strand 3
A
378 380anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 303first strand
Strand 2
A
306 308anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 387first strand
Strand 2
A
396 398anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 36first strand
Strand 2
B
46 49anti-parallel
Strand 3
B
313 316parallel
Strand 4
B
293 297anti-parallel
Strand 5
B
65 66anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 138first strand
Strand 2
B
400 402anti-parallel
Strand 3
B
379 380anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
301 303first strand
Strand 2
B
306 308anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
386 387first strand
Strand 2
B
396 398anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il