Analysis of interatomic Contacts of Structural Units in PDB entry:
2UWA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2UWA entry

There are 3 chains in PDB entry 2UWA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -2CYS 271
B
 ALA -2CYS 271
C
 ALA -2CYS 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 2UWA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 14Right-handed 310
Helix 2
2
A
18 22Right-handed alpha
Helix 3
3
A
28 30Right-handed 310
Helix 4
4
A
169 173Right-handed 310
Helix 5
5
A
193 196Right-handed 310
Helix 6
6
A
200 204Right-handed 310
Helix 7
7
A
238 252Right-handed alpha
Helix 8
8
A
258 260Right-handed 310
Helix 9
9
A
264 268Right-handed 310
Helix 10
10
B
9 14Right-handed alpha
Helix 11
11
B
18 22Right-handed alpha
Helix 12
12
B
28 30Right-handed 310
Helix 13
13
B
169 173Right-handed 310
Helix 14
14
B
200 204Right-handed 310
Helix 15
15
B
238 252Right-handed alpha
Helix 16
16
B
258 260Right-handed 310
Helix 17
17
B
264 268Right-handed 310
Helix 18
18
C
9 14Right-handed 310
Helix 19
19
C
18 22Right-handed alpha
Helix 20
20
C
28 30Right-handed 310
Helix 21
21
C
169 173Right-handed 310
Helix 22
22
C
200 204Right-handed 310
Helix 23
23
C
238 252Right-handed alpha
Helix 24
24
C
258 260Right-handed 310
Helix 25
25
C
264 268Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 2UWA. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 27first strand
Strand 2
A
49 53anti-parallel
Strand 3
A
179 186anti-parallel
Strand 4
A
76 83anti-parallel
Strand 5
A
94 100anti-parallel
Strand 6
A
109 115anti-parallel
Strand 7
A
129 131anti-parallel
Strand 8
A
253 256anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 35first strand
Strand 2
A
38 43anti-parallel
Strand 3
A
206 219anti-parallel
Strand 4
A
57 67anti-parallel
Strand 5
A
142 148anti-parallel
Strand 6
A
152 157anti-parallel
Strand 7
A
160 166anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 27first strand
Strand 2
B
49 53anti-parallel
Strand 3
B
179 186anti-parallel
Strand 4
B
76 83anti-parallel
Strand 5
B
94 100anti-parallel
Strand 6
B
109 115anti-parallel
Strand 7
B
129 131anti-parallel
Strand 8
B
253 256anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 35first strand
Strand 2
B
38 43anti-parallel
Strand 3
B
206 219anti-parallel
Strand 4
B
57 67anti-parallel
Strand 5
B
142 148anti-parallel
Strand 6
B
152 157anti-parallel
Strand 7
B
160 166anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 27first strand
Strand 2
C
49 53anti-parallel
Strand 3
C
179 186anti-parallel
Strand 4
C
76 83anti-parallel
Strand 5
C
94 100anti-parallel
Strand 6
C
109 115anti-parallel
Strand 7
C
129 131anti-parallel
Strand 8
C
253 256anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 35first strand
Strand 2
C
38 43anti-parallel
Strand 3
C
206 219anti-parallel
Strand 4
C
57 67anti-parallel
Strand 5
C
142 149anti-parallel
Strand 6
C
152 157anti-parallel
Strand 7
C
160 166anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il