Analysis of interatomic Contacts of Structural Units in PDB entry:
2UY6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2UY6 entry

There are 3 chains in PDB entry 2UY6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLU 217
B
 LYS 10GLN 163
C
 ALA 20GLN 163
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2UY6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
73 78Right-handed 310
Helix 2
2
A
117 121Right-handed 310
Helix 3
3
A
128 132Right-handed 310
Helix 4
4
A
159 166Right-handed alpha
Helix 5
5
B
39 46Right-handed alpha
Helix 6
6
C
25 30Right-handed alpha
Helix 7
7
C
40 45Right-handed alpha
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There are 8 sheets in PDB entry 2UY6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, CA, BA, CB, CC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
A
17 24anti-parallel
Strand 3
A
64 71anti-parallel
Strand 4
A
50 53anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
102 116parallel
Strand 3
A
84 93anti-parallel
Strand 4
A
31 38anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
102 116parallel
Strand 3
B
153 162parallel
Strand 4
B
77 82anti-parallel
Strand 5
B
115 118anti-parallel
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There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
151 157anti-parallel
Strand 3
A
190 193anti-parallel
Strand 4
A
202 207anti-parallel
Strand 5
A
211 214anti-parallel
Strand 6
A
133 137anti-parallel
Strand 7
A
140 145anti-parallel
Strand 8
A
177 182anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 39first strand
Strand 2
B
11 18parallel
Strand 3
C
150 162anti-parallel
Strand 4
C
76 82anti-parallel
Strand 5
C
122 123anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 25first strand
Strand 2
B
52 59anti-parallel
Strand 3
B
130 139anti-parallel
Strand 4
B
101 106anti-parallel
Strand 5
B
89 94anti-parallel
Strand 6
B
85 86anti-parallel
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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 24first strand
Strand 2
C
52 61anti-parallel
Strand 3
C
127 139anti-parallel
Strand 4
C
101 107anti-parallel
Strand 5
C
89 94anti-parallel
Strand 6
C
85 86anti-parallel
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There are 5 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 24first strand
Strand 2
C
52 61anti-parallel
Strand 3
C
127 139anti-parallel
Strand 4
C
101 107anti-parallel
Strand 5
C
110 111anti-parallel
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