Analysis of interatomic Contacts of Structural Units in PDB entry:
2UY7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2UY7 entry

There are 8 chains in PDB entry 2UY7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLU 217
B
 GLN 8GLN 163
C
 ALA 1GLU 217
D
 GLN 8GLN 163
E
 ALA 1GLU 217
F
 GLN 8GLN 163
G
 ALA 1GLU 217
H
 GLN 8GLN 163
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 23 helices in PDB entry 2UY7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
73 78Right-handed 310
Helix 2
2
A
117 121Right-handed 310
Helix 3
3
A
128 131Right-handed 310
Helix 4
4
A
159 166Right-handed alpha
Helix 5
5
B
39 45Right-handed alpha
Helix 6
6
C
73 78Right-handed 310
Helix 7
7
C
117 121Right-handed 310
Helix 8
8
C
128 131Right-handed 310
Helix 9
9
C
159 166Right-handed alpha
Helix 10
10
D
39 45Right-handed alpha
Helix 11
11
D
62 66Right-handed 310
Helix 12
12
E
73 78Right-handed 310
Helix 13
13
E
117 121Right-handed 310
Helix 14
14
E
128 131Right-handed 310
Helix 15
15
E
159 166Right-handed alpha
Helix 16
16
F
39 45Right-handed alpha
Helix 17
17
F
62 66Right-handed 310
Helix 18
18
G
73 78Right-handed 310
Helix 19
19
G
117 121Right-handed 310
Helix 20
20
G
128 131Right-handed 310
Helix 21
21
G
159 166Right-handed alpha
Helix 22
22
H
39 44Right-handed alpha
Helix 23
23
H
63 68Right-handed alpha
Back to top of page

There are 19 sheets in PDB entry 2UY7. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, CA, CB, CC, CD, A, EA, EB, EC, ED, FA, GA, GB, GC, HA,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
A
17 24anti-parallel
Strand 3
A
64 71anti-parallel
Strand 4
A
50 53anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
102 116parallel
Strand 3
A
84 93anti-parallel
Strand 4
A
31 38anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
102 116parallel
Strand 3
B
153 162parallel
Strand 4
B
77 82anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
151 157anti-parallel
Strand 3
A
190 194anti-parallel
Strand 4
A
202 208anti-parallel
Strand 5
A
211 214anti-parallel
Strand 6
A
133 137anti-parallel
Strand 7
A
140 145anti-parallel
Strand 8
A
177 182anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 25first strand
Strand 2
B
52 59anti-parallel
Strand 3
B
130 139anti-parallel
Strand 4
B
101 106anti-parallel
Strand 5
B
89 94anti-parallel
Strand 6
B
85 86anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 4first strand
Strand 2
C
17 24anti-parallel
Strand 3
C
64 71anti-parallel
Strand 4
C
50 53anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 12first strand
Strand 2
C
102 116parallel
Strand 3
C
84 93anti-parallel
Strand 4
C
31 38anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 12first strand
Strand 2
C
102 116parallel
Strand 3
D
153 162parallel
Strand 4
D
77 82anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
171 173first strand
Strand 2
C
151 157anti-parallel
Strand 3
C
190 194anti-parallel
Strand 4
C
202 208anti-parallel
Strand 5
C
211 214anti-parallel
Strand 6
C
133 137anti-parallel
Strand 7
C
140 145anti-parallel
Strand 8
C
177 182anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
23 25first strand
Strand 2
D
52 59anti-parallel
Strand 3
D
130 139anti-parallel
Strand 4
D
101 106anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 4first strand
Strand 2
E
17 24anti-parallel
Strand 3
E
64 71anti-parallel
Strand 4
E
50 53anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
8 12first strand
Strand 2
E
102 116parallel
Strand 3
E
84 93anti-parallel
Strand 4
E
31 38anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
8 12first strand
Strand 2
E
102 116parallel
Strand 3
F
153 162parallel
Strand 4
F
77 82anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in ED sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
171 173first strand
Strand 2
E
151 157anti-parallel
Strand 3
E
190 194anti-parallel
Strand 4
E
202 208anti-parallel
Strand 5
E
211 214anti-parallel
Strand 6
E
133 137anti-parallel
Strand 7
E
140 145anti-parallel
Strand 8
E
177 182anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
23 25first strand
Strand 2
F
52 59anti-parallel
Strand 3
F
130 139anti-parallel
Strand 4
F
101 107anti-parallel
Strand 5
F
85 86first strand
Strand 6
F
89 94anti-parallel
Strand 7
F
101 107anti-parallel
Strand 8
F
110 111anti-parallel
Strand 9
F
101 107anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
2 4first strand
Strand 2
G
17 24anti-parallel
Strand 3
G
64 71anti-parallel
Strand 4
G
50 53anti-parallel
Back to list of sheets
Back to top of page

There are 11 strands in GB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
8 12first strand
Strand 2
G
102 116parallel
Strand 3
G
44 45first strand
Strand 4
G
31 39anti-parallel
Strand 5
G
56 59anti-parallel
Strand 6
G
31 39anti-parallel
Strand 7
H
32 34first strand
Strand 8
G
102 116anti-parallel
Strand 9
H
77 82first strand
Strand 10
H
153 162anti-parallel
Strand 11
G
102 116parallel
Back to list of sheets
Back to top of page

There are 8 strands in GC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
171 173first strand
Strand 2
G
151 157anti-parallel
Strand 3
G
190 194anti-parallel
Strand 4
G
202 208anti-parallel
Strand 5
G
211 214anti-parallel
Strand 6
G
133 137anti-parallel
Strand 7
G
140 145anti-parallel
Strand 8
G
177 182anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
23 25first strand
Strand 2
H
52 59anti-parallel
Strand 3
H
130 139anti-parallel
Strand 4
H
101 107anti-parallel
Strand 5
H
85 86first strand
Strand 6
H
89 94anti-parallel
Strand 7
H
101 107anti-parallel
Strand 8
H
110 111anti-parallel
Strand 9
H
101 107anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il