Analysis of interatomic Contacts of Structural Units in PDB entry:
2UYU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2UYU entry

There are 2 chains in PDB entry 2UYU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 274
E
 MET 1LEU 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 2UYU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 6Right-handed 310
Helix 2
2
A
7 24Right-handed alpha
Helix 3
3
A
38 43Right-handed alpha
Helix 4
4
A
44 49Right-handed 310
Helix 5
5
A
62 66Right-handed 310
Helix 6
6
A
78 82Right-handed 310
Helix 7
7
A
85 89Right-handed alpha
Helix 8
8
A
117 132Right-handed alpha
Helix 9
9
A
144 151Right-handed alpha
Helix 10
10
A
157 169Right-handed alpha
Helix 11
11
A
171 176Right-handed alpha
Helix 12
12
A
190 201Right-handed alpha
Helix 13
13
A
220 244Right-handed alpha
Helix 14
14
A
252 264Right-handed alpha
Helix 15
15
A
268 273Right-handed alpha
Helix 16
16
E
3 6Right-handed 310
Helix 17
17
E
7 24Right-handed alpha
Helix 18
18
E
38 43Right-handed alpha
Helix 19
19
E
44 49Right-handed 310
Helix 20
20
E
62 66Right-handed 310
Helix 21
21
E
78 82Right-handed 310
Helix 22
22
E
85 89Right-handed alpha
Helix 23
23
E
117 133Right-handed alpha
Helix 24
24
E
144 151Right-handed alpha
Helix 25
25
E
157 169Right-handed alpha
Helix 26
26
E
171 176Right-handed alpha
Helix 27
27
E
190 202Right-handed alpha
Helix 28
28
E
220 244Right-handed alpha
Helix 29
29
E
252 264Right-handed alpha
Helix 30
30
E
268 273Right-handed alpha
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There are 2 sheets in PDB entry 2UYU. Click on sheet of interest to get list of strands forming it: AA, EA,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 57first strand
Strand 2
A
101 107anti-parallel
Strand 3
A
90 95anti-parallel
Strand 4
A
69 73anti-parallel
Strand 5
A
32 36anti-parallel
Strand 6
A
138 142anti-parallel
Strand 7
A
213 218anti-parallel
Strand 8
A
206 209anti-parallel
Strand 9
A
181 182parallel
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There are 9 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
55 57first strand
Strand 2
E
101 107anti-parallel
Strand 3
E
90 95anti-parallel
Strand 4
E
69 73anti-parallel
Strand 5
E
32 36anti-parallel
Strand 6
E
138 142anti-parallel
Strand 7
E
213 218anti-parallel
Strand 8
E
206 209anti-parallel
Strand 9
E
180 182parallel
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