Analysis of interatomic Contacts of Structural Units in PDB entry:
2UYY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2UYY entry

There are 4 chains in PDB entry 2UYY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 262HIS 553
B
 SER 262HIS 553
C
 SER 262HIS 553
D
 ILE 263HIS 553
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 2UYY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
276 289Right-handed alpha
Helix 2
2
A
299 302Right-handed 310
Helix 3
3
A
303 309Right-handed alpha
Helix 4
4
A
316 324Right-handed alpha
Helix 5
5
A
333 343Right-handed alpha
Helix 6
6
A
346 351Right-handed 310
Helix 7
7
A
364 378Right-handed alpha
Helix 8
8
A
390 397Right-handed alpha
Helix 9
9
A
406 413Right-handed alpha
Helix 10
10
A
413 420Right-handed alpha
Helix 11
11
A
431 461Right-handed alpha
Helix 12
12
A
464 475Right-handed alpha
Helix 13
13
A
479 492Right-handed alpha
Helix 14
14
A
499 517Right-handed alpha
Helix 15
15
A
521 537Right-handed alpha
Helix 16
16
A
544 551Right-handed 310
Helix 17
17
B
278 289Right-handed alpha
Helix 18
18
B
299 307Right-handed 310
Helix 19
19
B
316 324Right-handed alpha
Helix 20
20
B
333 343Right-handed alpha
Helix 21
21
B
346 351Right-handed alpha
Helix 22
22
B
364 378Right-handed alpha
Helix 23
23
B
390 397Right-handed alpha
Helix 24
24
B
406 413Right-handed alpha
Helix 25
25
B
413 420Right-handed alpha
Helix 26
26
B
431 461Right-handed alpha
Helix 27
27
B
464 475Right-handed alpha
Helix 28
28
B
479 492Right-handed alpha
Helix 29
29
B
499 517Right-handed alpha
Helix 30
30
B
521 537Right-handed alpha
Helix 31
31
B
544 551Right-handed 310
Helix 32
32
C
276 289Right-handed alpha
Helix 33
33
C
299 302Right-handed 310
Helix 34
34
C
303 309Right-handed alpha
Helix 35
35
C
316 324Right-handed alpha
Helix 36
36
C
333 343Right-handed alpha
Helix 37
37
C
346 351Right-handed 310
Helix 38
38
C
364 378Right-handed alpha
Helix 39
39
C
390 396Right-handed alpha
Helix 40
40
C
406 413Right-handed alpha
Helix 41
41
C
413 420Right-handed alpha
Helix 42
42
C
431 461Right-handed alpha
Helix 43
43
C
464 475Right-handed alpha
Helix 44
44
C
479 492Right-handed alpha
Helix 45
45
C
499 517Right-handed alpha
Helix 46
46
C
521 537Right-handed alpha
Helix 47
47
C
544 551Right-handed 310
Helix 48
48
D
276 289Right-handed alpha
Helix 49
49
D
299 302Right-handed 310
Helix 50
50
D
303 309Right-handed alpha
Helix 51
51
D
316 324Right-handed alpha
Helix 52
52
D
333 343Right-handed alpha
Helix 53
53
D
346 351Right-handed 310
Helix 54
54
D
364 378Right-handed alpha
Helix 55
55
D
390 397Right-handed alpha
Helix 56
56
D
406 413Right-handed alpha
Helix 57
57
D
413 420Right-handed alpha
Helix 58
58
D
431 461Right-handed alpha
Helix 59
59
D
464 475Right-handed alpha
Helix 60
60
D
479 492Right-handed alpha
Helix 61
61
D
499 517Right-handed alpha
Helix 62
62
D
521 537Right-handed alpha
Helix 63
63
D
544 551Right-handed 310
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There are 7 sheets in PDB entry 2UYY. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, DA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
293 296parallel
Strand 3
A
270 273parallel
Strand 4
A
326 329parallel
Strand 5
A
356 359parallel
Strand 6
A
381 384parallel
Strand 7
A
399 405anti-parallel
Strand 8
A
387 388anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
293 296parallel
Strand 3
A
270 273parallel
Strand 4
A
326 329parallel
Strand 5
A
356 359parallel
Strand 6
A
381 384parallel
Strand 7
A
399 405anti-parallel
Strand 8
A
421 426parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
312 313first strand
Strand 2
B
293 296parallel
Strand 3
B
270 273parallel
Strand 4
B
326 329parallel
Strand 5
B
356 359parallel
Strand 6
B
381 384parallel
Strand 7
B
399 405anti-parallel
Strand 8
B
387 388anti-parallel
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There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
312 313first strand
Strand 2
B
293 296parallel
Strand 3
B
270 273parallel
Strand 4
B
326 329parallel
Strand 5
B
356 359parallel
Strand 6
B
381 384parallel
Strand 7
B
399 405anti-parallel
Strand 8
B
421 426parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
312 313first strand
Strand 2
C
293 296parallel
Strand 3
C
270 273parallel
Strand 4
C
326 329parallel
Strand 5
C
356 359parallel
Strand 6
C
381 384parallel
Strand 7
C
399 405anti-parallel
Strand 8
C
387 388anti-parallel
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There are 8 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
312 313first strand
Strand 2
C
293 296parallel
Strand 3
C
270 273parallel
Strand 4
C
326 329parallel
Strand 5
C
356 359parallel
Strand 6
C
381 384parallel
Strand 7
C
399 405anti-parallel
Strand 8
C
421 426parallel
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There are 11 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
312 313first strand
Strand 2
D
292 296parallel
Strand 3
D
269 273parallel
Strand 4
D
326 329parallel
Strand 5
D
356 359parallel
Strand 6
D
381 384parallel
Strand 7
D
399 405anti-parallel
Strand 8
D
387 388anti-parallel
Strand 9
D
399 405anti-parallel
Strand 10
D
421 426parallel
Strand 11
D
399 405parallel
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