Analysis of interatomic Contacts of Structural Units in PDB entry:
2UZF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2UZF entry

There are 2 chains in PDB entry 2UZF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 6PRO 273
B
 TRP 6PRO 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 2UZF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 34Right-handed 310
Helix 2
2
A
38 55Right-handed alpha
Helix 3
3
A
95 106Right-handed alpha
Helix 4
4
A
120 129Right-handed alpha
Helix 5
5
A
143 147Right-handed 310
Helix 6
6
A
156 164Right-handed alpha
Helix 7
7
A
164 174Right-handed alpha
Helix 8
8
A
180 186Right-handed alpha
Helix 9
9
A
194 197Right-handed 310
Helix 10
10
A
198 210Right-handed alpha
Helix 11
11
A
213 229Right-handed alpha
Helix 12
12
A
229 247Right-handed alpha
Helix 13
13
A
248 260Right-handed alpha
Helix 14
14
B
30 34Right-handed 310
Helix 15
15
B
38 55Right-handed alpha
Helix 16
16
B
95 103Right-handed alpha
Helix 17
17
B
120 129Right-handed alpha
Helix 18
18
B
143 148Right-handed alpha
Helix 19
19
B
156 164Right-handed alpha
Helix 20
20
B
164 175Right-handed alpha
Helix 21
21
B
180 187Right-handed alpha
Helix 22
22
B
194 198Right-handed 310
Helix 23
23
B
201 210Right-handed alpha
Helix 24
24
B
213 229Right-handed alpha
Helix 25
25
B
229 247Right-handed alpha
Helix 26
26
B
248 260Right-handed alpha
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There are 4 sheets in PDB entry 2UZF. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 20first strand
Strand 2
A
23 28anti-parallel
Strand 3
A
60 65parallel
Strand 4
A
110 114parallel
Strand 5
A
131 135parallel
Strand 6
A
191 193parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 72first strand
Strand 2
A
116 119parallel
Strand 3
A
139 141parallel
Strand 4
A
178 179anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 9first strand
Strand 2
B
15 20anti-parallel
Strand 3
B
23 28anti-parallel
Strand 4
B
60 65parallel
Strand 5
B
110 114parallel
Strand 6
B
131 135parallel
Strand 7
B
191 193parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 72first strand
Strand 2
B
116 119parallel
Strand 3
B
139 141parallel
Strand 4
B
178 179anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il