Analysis of interatomic Contacts of Structural Units in PDB entry:
2UZJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2UZJ entry

There are 2 chains in PDB entry 2UZJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1PRO 253
B
 GLN 1PRO 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2UZJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 11Right-handed alpha
Helix 2
2
A
46 60Right-handed alpha
Helix 3
3
A
89 93Right-handed 310
Helix 4
4
A
109 127Right-handed alpha
Helix 5
5
A
139 150Right-handed alpha
Helix 6
6
A
163 165Right-handed 310
Helix 7
7
A
166 180Right-handed alpha
Helix 8
8
A
229 233Right-handed 310
Helix 9
9
B
6 11Right-handed alpha
Helix 10
10
B
46 60Right-handed alpha
Helix 11
11
B
89 93Right-handed 310
Helix 12
12
B
109 127Right-handed alpha
Helix 13
13
B
139 150Right-handed alpha
Helix 14
14
B
163 165Right-handed 310
Helix 15
15
B
166 180Right-handed alpha
Helix 16
16
B
229 233Right-handed 310
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There are 6 sheets in PDB entry 2UZJ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
193 203parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 161first strand
Strand 2
A
243 249anti-parallel
Strand 3
A
184 190anti-parallel
Strand 4
A
193 203anti-parallel
Strand 5
A
208 211anti-parallel
Strand 6
A
220 222anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 161first strand
Strand 2
A
243 249anti-parallel
Strand 3
A
184 190anti-parallel
Strand 4
A
193 203anti-parallel
Strand 5
A
3 4parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 72first strand
Strand 2
A
85 88anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 72first strand
Strand 2
B
85 88anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 161first strand
Strand 2
B
243 249anti-parallel
Strand 3
B
184 190anti-parallel
Strand 4
B
193 202anti-parallel
Strand 5
B
207 211anti-parallel
Strand 6
B
220 223anti-parallel
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