Analysis of interatomic Contacts of Structural Units in PDB entry:
2UZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2UZZ entry

There are 4 chains in PDB entry 2UZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2GLN 372
B
 MET 1GLN 372
C
 LYS 2ARG 370
D
 LYS 2PHE 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 2UZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 24Right-handed alpha
Helix 2
2
A
57 59Right-handed 310
Helix 3
3
A
60 77Right-handed alpha
Helix 4
4
A
97 110Right-handed alpha
Helix 5
5
A
119 126Right-handed alpha
Helix 6
6
A
148 162Right-handed alpha
Helix 7
7
A
200 207Right-handed 310
Helix 8
8
A
226 230Right-handed 310
Helix 9
9
A
271 275Right-handed 310
Helix 10
10
A
283 287Right-handed 310
Helix 11
11
A
288 296Right-handed alpha
Helix 12
12
A
339 341Right-handed 310
Helix 13
13
A
342 355Right-handed alpha
Helix 14
14
A
363 367Right-handed 310
Helix 15
15
B
11 25Right-handed alpha
Helix 16
16
B
57 59Right-handed 310
Helix 17
17
B
60 78Right-handed alpha
Helix 18
18
B
97 110Right-handed alpha
Helix 19
19
B
118 126Right-handed alpha
Helix 20
20
B
148 162Right-handed alpha
Helix 21
21
B
200 207Right-handed 310
Helix 22
22
B
226 230Right-handed 310
Helix 23
23
B
230 234Right-handed 310
Helix 24
24
B
271 275Right-handed 310
Helix 25
25
B
283 287Right-handed 310
Helix 26
26
B
288 296Right-handed alpha
Helix 27
27
B
339 341Right-handed 310
Helix 28
28
B
342 354Right-handed alpha
Helix 29
29
B
363 367Right-handed 310
Helix 30
30
C
13 24Right-handed alpha
Helix 31
31
C
57 59Right-handed 310
Helix 32
32
C
60 76Right-handed alpha
Helix 33
33
C
97 110Right-handed alpha
Helix 34
34
C
118 126Right-handed alpha
Helix 35
35
C
148 162Right-handed alpha
Helix 36
36
C
203 207Right-handed 310
Helix 37
37
C
226 230Right-handed 310
Helix 38
38
C
230 234Right-handed 310
Helix 39
39
C
271 275Right-handed 310
Helix 40
40
C
277 281Right-handed 310
Helix 41
41
C
283 287Right-handed 310
Helix 42
42
C
288 296Right-handed alpha
Helix 43
43
C
342 355Right-handed alpha
Helix 44
44
C
363 367Right-handed 310
Helix 45
45
D
11 24Right-handed alpha
Helix 46
46
D
57 59Right-handed 310
Helix 47
47
D
60 76Right-handed alpha
Helix 48
48
D
97 110Right-handed alpha
Helix 49
49
D
118 126Right-handed alpha
Helix 50
50
D
148 162Right-handed alpha
Helix 51
51
D
200 207Right-handed 310
Helix 52
52
D
226 230Right-handed 310
Helix 53
53
D
271 275Right-handed 310
Helix 54
54
D
277 281Right-handed 310
Helix 55
55
D
288 295Right-handed alpha
Helix 56
56
D
339 341Right-handed 310
Helix 57
57
D
342 355Right-handed alpha
Helix 58
58
D
363 367Right-handed 310
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There are 19 sheets in PDB entry 2UZZ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE, CA, CB, CC, CD, CE, DA, DB, C, DD,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 167first strand
Strand 2
A
28 31parallel
Strand 3
A
3 7parallel
Strand 4
A
190 198parallel
Strand 5
A
182 186anti-parallel
Strand 6
A
172 177anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 167first strand
Strand 2
A
28 31parallel
Strand 3
A
3 7parallel
Strand 4
A
190 198parallel
Strand 5
A
326 332parallel
Strand 6
A
320 323anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
144 147anti-parallel
Strand 3
A
84 85anti-parallel
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There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 118first strand
Strand 2
A
135 140anti-parallel
Strand 3
A
89 94anti-parallel
Strand 4
A
237 241parallel
Strand 5
A
247 251anti-parallel
Strand 6
A
258 262anti-parallel
Strand 7
A
220 223anti-parallel
Strand 8
A
302 305anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 268first strand
Strand 2
A
214 217anti-parallel
Strand 3
A
309 312anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 167first strand
Strand 2
B
28 31parallel
Strand 3
B
5 7parallel
Strand 4
B
196 198parallel
Strand 5
B
326 332parallel
Strand 6
B
320 323anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 50first strand
Strand 2
B
144 147anti-parallel
Strand 3
B
84 85anti-parallel
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There are 8 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 117first strand
Strand 2
B
135 140anti-parallel
Strand 3
B
89 94anti-parallel
Strand 4
B
237 241parallel
Strand 5
B
247 250anti-parallel
Strand 6
B
257 262anti-parallel
Strand 7
B
214 224anti-parallel
Strand 8
B
302 312anti-parallel
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There are 8 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 117first strand
Strand 2
B
135 140anti-parallel
Strand 3
B
89 94anti-parallel
Strand 4
B
237 241parallel
Strand 5
B
247 250anti-parallel
Strand 6
B
257 262anti-parallel
Strand 7
B
214 224anti-parallel
Strand 8
B
267 268anti-parallel
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There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 177first strand
Strand 2
B
182 186anti-parallel
Strand 3
B
190 193anti-parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
165 167first strand
Strand 2
C
28 31parallel
Strand 3
C
3 7parallel
Strand 4
C
192 198parallel
Strand 5
C
182 183anti-parallel
Strand 6
C
176 177anti-parallel
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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
165 167first strand
Strand 2
C
28 31parallel
Strand 3
C
3 7parallel
Strand 4
C
192 198parallel
Strand 5
C
326 332parallel
Strand 6
C
320 323anti-parallel
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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 50first strand
Strand 2
C
144 147anti-parallel
Strand 3
C
84 85anti-parallel
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There are 8 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
114 117first strand
Strand 2
C
135 140anti-parallel
Strand 3
C
89 94anti-parallel
Strand 4
C
237 240parallel
Strand 5
C
248 251anti-parallel
Strand 6
C
257 262anti-parallel
Strand 7
C
220 224anti-parallel
Strand 8
C
302 305anti-parallel
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There are 3 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
267 268first strand
Strand 2
C
214 218anti-parallel
Strand 3
C
308 312anti-parallel
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There are 10 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
165 167first strand
Strand 2
D
28 31parallel
Strand 3
D
3 7parallel
Strand 4
D
190 198parallel
Strand 5
D
172 177first strand
Strand 6
D
182 186anti-parallel
Strand 7
D
190 198anti-parallel
Strand 8
D
320 322first strand
Strand 9
D
329 332anti-parallel
Strand 10
D
190 198parallel
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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 50first strand
Strand 2
D
144 147anti-parallel
Strand 3
D
84 85anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
114 117first strand
Strand 2
D
135 140anti-parallel
Strand 3
D
89 94anti-parallel
Strand 4
D
237 241parallel
Strand 5
D
247 251anti-parallel
Strand 6
D
257 262anti-parallel
Strand 7
D
220 224anti-parallel
Strand 8
D
302 305anti-parallel
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There are 3 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
267 268first strand
Strand 2
D
214 218anti-parallel
Strand 3
D
308 312anti-parallel
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