Analysis of interatomic Contacts of Structural Units in PDB entry:
2V03


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V03 entry

There is 1 chain in PDB entry 2V03 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 2V03. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 8Right-handed 310
Helix 2
2
A
33 35Right-handed 310
Helix 3
3
A
40 55Right-handed alpha
Helix 4
4
A
70 84Right-handed alpha
Helix 5
5
A
96 106Right-handed alpha
Helix 6
6
A
117 132Right-handed alpha
Helix 7
7
A
144 153Right-handed alpha
Helix 8
8
A
153 162Right-handed alpha
Helix 9
9
A
176 188Right-handed alpha
Helix 10
10
A
213 217Right-handed 310
Helix 11
11
A
222 226Right-handed 310
Helix 12
12
A
233 249Right-handed alpha
Helix 13
13
A
253 270Right-handed alpha
Helix 14
14
A
283 290Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 2V03. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
26 31anti-parallel
Strand 3
A
274 279parallel
Strand 4
A
168 172parallel
Strand 5
A
194 200parallel
Strand 6
A
228 232parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 113first strand
Strand 2
A
86 92parallel
Strand 3
A
63 67parallel
Strand 4
A
136 137parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il