Analysis of interatomic Contacts of Structural Units in PDB entry:
2V0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V0M entry

There are 4 chains in PDB entry 2V0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 30GLY 498
B
 HIS 30ARG 496
C
 HIS 30ARG 496
D
 HIS 30ARG 496
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 2V0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 36Right-handed alpha
Helix 2
2
A
49 55Right-handed 310
Helix 3
3
A
56 69Right-handed alpha
Helix 4
4
A
86 95Right-handed alpha
Helix 5
5
A
111 117Right-handed 310
Helix 6
6
A
117 121Right-handed 310
Helix 7
7
A
122 134Right-handed alpha
Helix 8
8
A
135 138Right-handed 310
Helix 9
9
A
140 167Right-handed alpha
Helix 10
10
A
172 190Right-handed alpha
Helix 11
11
A
201 209Right-handed alpha
Helix 12
12
A
217 226Right-handed alpha
Helix 13
13
A
229 236Right-handed alpha
Helix 14
14
A
242 261Right-handed alpha
Helix 15
15
A
270 277Right-handed alpha
Helix 16
16
A
291 323Right-handed alpha
Helix 17
17
A
324 339Right-handed alpha
Helix 18
18
A
346 351Right-handed alpha
Helix 19
19
A
353 367Right-handed alpha
Helix 20
20
A
397 402Right-handed alpha
Helix 21
21
A
415 420Right-handed 310
Helix 22
22
A
423 427Right-handed 310
Helix 23
23
A
444 461Right-handed alpha
Helix 24
24
B
31 36Right-handed alpha
Helix 25
25
B
49 55Right-handed 310
Helix 26
26
B
56 69Right-handed alpha
Helix 27
27
B
86 95Right-handed alpha
Helix 28
28
B
111 117Right-handed 310
Helix 29
29
B
122 134Right-handed alpha
Helix 30
30
B
135 138Right-handed 310
Helix 31
31
B
145 167Right-handed alpha
Helix 32
32
B
172 190Right-handed alpha
Helix 33
33
B
201 208Right-handed alpha
Helix 34
34
B
217 226Right-handed alpha
Helix 35
35
B
229 236Right-handed alpha
Helix 36
36
B
242 262Right-handed alpha
Helix 37
37
B
270 277Right-handed alpha
Helix 38
38
B
291 324Right-handed alpha
Helix 39
39
B
324 339Right-handed alpha
Helix 40
40
B
340 343Right-handed 310
Helix 41
41
B
346 353Right-handed alpha
Helix 42
42
B
353 367Right-handed alpha
Helix 43
43
B
397 402Right-handed alpha
Helix 44
44
B
415 419Right-handed 310
Helix 45
45
B
420 425Right-handed alpha
Helix 46
46
B
444 461Right-handed alpha
Helix 47
47
C
31 37Right-handed alpha
Helix 48
48
C
49 55Right-handed 310
Helix 49
49
C
56 69Right-handed alpha
Helix 50
50
C
86 95Right-handed alpha
Helix 51
51
C
111 117Right-handed 310
Helix 52
52
C
122 134Right-handed alpha
Helix 53
53
C
135 138Right-handed 310
Helix 54
54
C
140 167Right-handed alpha
Helix 55
55
C
172 190Right-handed alpha
Helix 56
56
C
194 198Right-handed 310
Helix 57
57
C
201 208Right-handed alpha
Helix 58
58
C
209 211Right-handed 310
Helix 59
59
C
217 226Right-handed alpha
Helix 60
60
C
229 236Right-handed alpha
Helix 61
61
C
242 261Right-handed alpha
Helix 62
62
C
270 279Right-handed alpha
Helix 63
63
C
291 324Right-handed alpha
Helix 64
64
C
324 339Right-handed alpha
Helix 65
65
C
346 353Right-handed alpha
Helix 66
66
C
353 367Right-handed alpha
Helix 67
67
C
397 402Right-handed alpha
Helix 68
68
C
415 420Right-handed 310
Helix 69
69
C
423 427Right-handed 310
Helix 70
70
C
444 461Right-handed alpha
Helix 71
71
D
31 37Right-handed alpha
Helix 72
72
D
49 54Right-handed 310
Helix 73
73
D
56 69Right-handed alpha
Helix 74
74
D
86 95Right-handed alpha
Helix 75
75
D
111 117Right-handed 310
Helix 76
76
D
122 134Right-handed alpha
Helix 77
77
D
135 138Right-handed 310
Helix 78
78
D
145 167Right-handed alpha
Helix 79
79
D
172 190Right-handed alpha
Helix 80
80
D
194 198Right-handed 310
Helix 81
81
D
201 208Right-handed alpha
Helix 82
82
D
217 226Right-handed alpha
Helix 83
83
D
228 236Right-handed alpha
Helix 84
84
D
242 262Right-handed alpha
Helix 85
85
D
270 278Right-handed alpha
Helix 86
86
D
291 324Right-handed alpha
Helix 87
87
D
324 339Right-handed alpha
Helix 88
88
D
346 352Right-handed alpha
Helix 89
89
D
353 367Right-handed alpha
Helix 90
90
D
397 402Right-handed alpha
Helix 91
91
D
415 420Right-handed 310
Helix 92
92
D
423 427Right-handed 310
Helix 93
93
D
444 461Right-handed alpha
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There are 12 sheets in PDB entry 2V0M. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 76first strand
Strand 2
A
79 84anti-parallel
Strand 3
A
393 396parallel
Strand 4
A
373 376anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
490 495anti-parallel
Strand 3
A
463 466anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 383first strand
Strand 2
A
386 388anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 76first strand
Strand 2
B
79 84anti-parallel
Strand 3
B
393 396parallel
Strand 4
B
373 376anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 171first strand
Strand 2
B
490 495anti-parallel
Strand 3
B
463 466anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
381 383first strand
Strand 2
B
386 388anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
71 76first strand
Strand 2
C
79 84anti-parallel
Strand 3
C
393 396parallel
Strand 4
C
373 376anti-parallel
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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
170 171first strand
Strand 2
C
490 495anti-parallel
Strand 3
C
463 467anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
381 383first strand
Strand 2
C
386 388anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
72 76first strand
Strand 2
D
79 83anti-parallel
Strand 3
D
393 396parallel
Strand 4
D
373 376anti-parallel
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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
170 171first strand
Strand 2
D
490 495anti-parallel
Strand 3
D
463 467anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
381 383first strand
Strand 2
D
386 388anti-parallel
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