Analysis of interatomic Contacts of Structural Units in PDB entry:
2V0V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V0V entry

There are 4 chains in PDB entry 2V0V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 396LYS 576
B
 LYS 396LYS 576
C
 GLY 398LYS 576
D
 GLY 398LYS 576
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 2V0V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
401 407Right-handed alpha
Helix 2
2
A
412 423Right-handed alpha
Helix 3
3
A
430 451Right-handed alpha
Helix 4
4
A
481 496Right-handed alpha
Helix 5
5
A
499 512Right-handed alpha
Helix 6
6
A
515 519Right-handed 310
Helix 7
7
A
521 544Right-handed alpha
Helix 8
8
A
545 550Right-handed 310
Helix 9
9
A
551 556Right-handed alpha
Helix 10
10
A
556 569Right-handed alpha
Helix 11
11
A
570 572Right-handed 310
Helix 12
12
B
401 407Right-handed alpha
Helix 13
13
B
412 423Right-handed alpha
Helix 14
14
B
430 450Right-handed alpha
Helix 15
15
B
473 478Right-handed alpha
Helix 16
16
B
480 496Right-handed alpha
Helix 17
17
B
499 512Right-handed alpha
Helix 18
18
B
521 544Right-handed alpha
Helix 19
19
B
548 556Right-handed alpha
Helix 20
20
B
556 569Right-handed alpha
Helix 21
21
B
569 574Right-handed alpha
Helix 22
22
C
401 407Right-handed alpha
Helix 23
23
C
412 422Right-handed alpha
Helix 24
24
C
425 429Right-handed 310
Helix 25
25
C
430 450Right-handed alpha
Helix 26
26
C
451 454Right-handed 310
Helix 27
27
C
481 494Right-handed alpha
Helix 28
28
C
499 513Right-handed alpha
Helix 29
29
C
515 519Right-handed 310
Helix 30
30
C
521 544Right-handed alpha
Helix 31
31
C
548 556Right-handed alpha
Helix 32
32
C
556 569Right-handed alpha
Helix 33
33
D
402 410Right-handed alpha
Helix 34
34
D
414 423Right-handed alpha
Helix 35
35
D
430 450Right-handed alpha
Helix 36
36
D
451 453Right-handed 310
Helix 37
37
D
473 478Right-handed alpha
Helix 38
38
D
480 496Right-handed alpha
Helix 39
39
D
499 512Right-handed alpha
Helix 40
40
D
515 519Right-handed 310
Helix 41
41
D
521 544Right-handed alpha
Helix 42
42
D
548 569Right-handed alpha
Helix 43
43
D
569 574Right-handed alpha
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There are 4 sheets in PDB entry 2V0V. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 455first strand
Strand 2
A
460 461anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
454 455first strand
Strand 2
B
460 461anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
462 463first strand
Strand 2
C
467 468anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
462 463first strand
Strand 2
D
467 468anti-parallel
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