Analysis of interatomic Contacts of Structural Units in PDB entry:
2V1S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V1S entry

There are 14 chains in PDB entry 2V1S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 61LEU 126
B
 LYS 61LEU 126
C
 SER 58LEU 126
D
 GLY 57LEU 123
E
 LEU 56LEU 126
F
 ALA 63LEU 126
G
 ALA 63LEU 76
H
 PRO 13GLY 23
I
 ARG 14GLY 23
J
 GLY 12GLY 23
K
 ARG 14GLY 23
L
 GLY 12GLY 23
M
 LEU 18GLY 23
N
 ARG 14ALA 22
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 2V1S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 83Right-handed alpha
Helix 2
2
A
85 99Right-handed alpha
Helix 3
3
A
103 114Right-handed alpha
Helix 4
4
A
115 125Right-handed alpha
Helix 5
5
B
64 82Right-handed alpha
Helix 6
6
B
85 99Right-handed alpha
Helix 7
7
B
103 114Right-handed alpha
Helix 8
8
B
115 124Right-handed alpha
Helix 9
9
C
59 83Right-handed alpha
Helix 10
10
C
85 99Right-handed alpha
Helix 11
11
C
103 114Right-handed alpha
Helix 12
12
C
115 124Right-handed alpha
Helix 13
13
D
58 83Right-handed alpha
Helix 14
14
D
86 99Right-handed alpha
Helix 15
15
D
103 112Right-handed alpha
Helix 16
16
D
115 121Right-handed alpha
Helix 17
17
E
59 84Right-handed alpha
Helix 18
18
E
85 99Right-handed alpha
Helix 19
19
E
103 114Right-handed alpha
Helix 20
20
E
115 124Right-handed alpha
Helix 21
21
F
63 83Right-handed alpha
Helix 22
22
F
85 99Right-handed alpha
Helix 23
23
F
103 114Right-handed alpha
Helix 24
24
F
115 125Right-handed alpha
Helix 25
25
G
64 74Right-handed alpha
Helix 26
26
H
14 22Right-handed alpha
Helix 27
27
I
14 22Right-handed alpha
Helix 28
28
J
14 23Right-handed alpha
Helix 29
29
K
14 23Right-handed alpha
Helix 30
30
L
14 23Right-handed alpha
Helix 31
31
N
14 21Right-handed alpha
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There are no sheets in PDB entry 2V1S
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il