Analysis of interatomic Contacts of Structural Units in PDB entry:
2V1Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V1Z entry

There is 1 chain in PDB entry 2V1Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1LEU 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2V1Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 16Right-handed alpha
Helix 2
2
A
51 66Right-handed alpha
Helix 3
3
A
78 82Right-handed 310
Helix 4
4
A
88 92Right-handed 310
Helix 5
5
A
99 109Right-handed alpha
Helix 6
6
A
111 123Right-handed alpha
Helix 7
7
A
124 135Right-handed alpha
Helix 8
8
A
147 151Right-handed 310
Helix 9
9
A
162 176Right-handed alpha
Helix 10
10
A
180 193Right-handed alpha
Helix 11
11
A
200 205Right-handed 310
Helix 12
12
A
249 267Right-handed alpha
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There are 3 sheets in PDB entry 2V1Z. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
23 30anti-parallel
Strand 3
A
237 244anti-parallel
Strand 4
A
223 230anti-parallel
Strand 5
A
210 217anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
160 161anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
97 98anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il