Analysis of interatomic Contacts of Structural Units in PDB entry:
2V2D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V2D entry

There is 1 chain in PDB entry 2V2D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLN 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2V2D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 30Right-handed alpha
Helix 2
2
A
44 55Right-handed alpha
Helix 3
3
A
69 87Right-handed alpha
Helix 4
4
A
95 101Right-handed alpha
Helix 5
5
A
105 118Right-handed alpha
Helix 6
6
A
130 136Right-handed alpha
Helix 7
7
A
138 153Right-handed alpha
Helix 8
8
A
155 160Right-handed 310
Helix 9
9
A
168 172Right-handed 310
Helix 10
10
A
179 198Right-handed alpha
Helix 11
11
A
199 206Right-handed alpha
Helix 12
12
A
215 225Right-handed alpha
Helix 13
13
A
235 240Right-handed 310
Helix 14
14
A
241 248Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2V2D.

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 11first strand
Strand 2
A
38 43parallel
Strand 3
A
60 64parallel
Strand 4
A
90 93parallel
Strand 5
A
122 127parallel
Strand 6
A
162 166parallel
Strand 7
A
208 210parallel
Strand 8
A
230 233parallel
Strand 9
A
7 11parallel
Strand 10
A
7 11first strand
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