Analysis of interatomic Contacts of Structural Units in PDB entry:
2V2V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V2V entry

There are 2 chains in PDB entry 2V2V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1LEU 268
B
 SER -1LEU 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 2V2V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
60 74Right-handed alpha
Helix 2
2
A
94 111Right-handed alpha
Helix 3
3
A
116 128Right-handed alpha
Helix 4
4
A
132 137Right-handed alpha
Helix 5
5
A
170 176Right-handed alpha
Helix 6
6
A
179 182Right-handed 310
Helix 7
7
A
185 198Right-handed alpha
Helix 8
8
A
200 204Right-handed 310
Helix 9
9
A
206 216Right-handed alpha
Helix 10
10
A
216 229Right-handed alpha
Helix 11
11
A
249 260Right-handed alpha
Helix 12
12
B
56 59Right-handed 310
Helix 13
13
B
60 74Right-handed alpha
Helix 14
14
B
94 111Right-handed alpha
Helix 15
15
B
116 128Right-handed alpha
Helix 16
16
B
130 136Right-handed 310
Helix 17
17
B
170 176Right-handed alpha
Helix 18
18
B
179 183Right-handed 310
Helix 19
19
B
185 198Right-handed alpha
Helix 20
20
B
200 204Right-handed 310
Helix 21
21
B
206 216Right-handed alpha
Helix 22
22
B
216 229Right-handed alpha
Helix 23
23
B
249 260Right-handed alpha
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There are 6 sheets in PDB entry 2V2V. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 19first strand
Strand 2
A
25 44anti-parallel
Strand 3
A
139 143anti-parallel
Strand 4
A
148 151anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 19first strand
Strand 2
A
25 44anti-parallel
Strand 3
A
79 84anti-parallel
Strand 4
A
48 51parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 235first strand
Strand 2
A
242 244anti-parallel
Strand 3
A
158 164anti-parallel
Strand 4
A
262 268anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 19first strand
Strand 2
B
25 44anti-parallel
Strand 3
B
139 143anti-parallel
Strand 4
B
148 152anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 19first strand
Strand 2
B
25 44anti-parallel
Strand 3
B
79 84anti-parallel
Strand 4
B
48 51parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 235first strand
Strand 2
B
242 244anti-parallel
Strand 3
B
158 164anti-parallel
Strand 4
B
262 268anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il