Analysis of interatomic Contacts of Structural Units in PDB entry:
2V36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V36 entry

There are 4 chains in PDB entry 2V36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 34GLN 394
B
 THR 403LYS 587
C
 TYR 38PRO 395
D
 THR 403LYS 585
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 2V36. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 38Right-handed 310
Helix 2
2
A
53 66Right-handed alpha
Helix 3
3
A
69 85Right-handed alpha
Helix 4
4
A
134 139Right-handed alpha
Helix 5
5
A
140 145Right-handed 310
Helix 6
6
A
149 162Right-handed alpha
Helix 7
7
A
165 180Right-handed alpha
Helix 8
8
A
184 194Right-handed alpha
Helix 9
9
A
194 199Right-handed alpha
Helix 10
10
A
200 202Right-handed 310
Helix 11
11
A
203 208Right-handed alpha
Helix 12
12
A
222 236Right-handed alpha
Helix 13
13
A
237 242Right-handed alpha
Helix 14
14
A
242 256Right-handed alpha
Helix 15
15
A
261 268Right-handed alpha
Helix 16
16
A
293 307Right-handed alpha
Helix 17
17
A
317 339Right-handed alpha
Helix 18
18
A
348 354Right-handed alpha
Helix 19
19
A
354 364Right-handed alpha
Helix 20
20
A
378 383Right-handed 310
Helix 21
21
B
441 446Right-handed 310
Helix 22
22
B
485 487Right-handed 310
Helix 23
23
B
488 502Right-handed alpha
Helix 24
24
B
506 513Right-handed alpha
Helix 25
25
C
53 66Right-handed alpha
Helix 26
26
C
69 85Right-handed alpha
Helix 27
27
C
134 139Right-handed alpha
Helix 28
28
C
140 145Right-handed 310
Helix 29
29
C
149 162Right-handed alpha
Helix 30
30
C
165 180Right-handed alpha
Helix 31
31
C
184 194Right-handed alpha
Helix 32
32
C
194 199Right-handed alpha
Helix 33
33
C
200 202Right-handed 310
Helix 34
34
C
203 208Right-handed alpha
Helix 35
35
C
222 236Right-handed alpha
Helix 36
36
C
237 242Right-handed alpha
Helix 37
37
C
242 256Right-handed alpha
Helix 38
38
C
261 268Right-handed alpha
Helix 39
39
C
293 307Right-handed alpha
Helix 40
40
C
308 313Right-handed 310
Helix 41
41
C
317 339Right-handed alpha
Helix 42
42
C
348 354Right-handed alpha
Helix 43
43
C
354 364Right-handed alpha
Helix 44
44
C
378 383Right-handed 310
Helix 45
45
D
441 446Right-handed 310
Helix 46
46
D
485 487Right-handed 310
Helix 47
47
D
488 502Right-handed alpha
Helix 48
48
D
506 513Right-handed alpha
Helix 49
49
D
531 538Right-handed alpha
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There are 8 sheets in PDB entry 2V36. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, CA, CB, CC, A,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
B
566 570anti-parallel
Strand 3
B
556 561anti-parallel
Strand 4
B
476 482anti-parallel
Strand 5
B
469 473anti-parallel
Strand 6
A
283 287anti-parallel
Strand 7
A
276 280anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
B
404 410anti-parallel
Strand 3
B
415 421anti-parallel
Strand 4
A
94 100anti-parallel
Strand 5
A
107 111anti-parallel
Strand 6
A
271 273anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 182first strand
Strand 2
A
219 220anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
516 520first strand
Strand 2
B
523 526anti-parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 44first strand
Strand 2
D
566 571anti-parallel
Strand 3
D
556 561anti-parallel
Strand 4
D
476 481anti-parallel
Strand 5
D
469 473anti-parallel
Strand 6
C
283 287anti-parallel
Strand 7
C
276 280anti-parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
271 273first strand
Strand 2
C
107 111anti-parallel
Strand 3
C
94 100anti-parallel
Strand 4
D
415 421anti-parallel
Strand 5
D
404 410anti-parallel
Strand 6
C
47 51anti-parallel
Strand 7
D
578 581anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
181 182first strand
Strand 2
C
219 220anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
516 520first strand
Strand 2
D
523 526anti-parallel
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