Analysis of interatomic Contacts of Structural Units in PDB entry:
2V3N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V3N entry

There is 1 chain in PDB entry 2V3N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 1TRP 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2V3N. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
9 26Right-handed alpha
Helix 2
2
A
33 43Right-handed alpha
Helix 3
3
A
49 67Right-handed alpha
Helix 4
4
A
83 97Right-handed alpha
Helix 5
5
A
102 125Right-handed alpha
Helix 6
6
A
135 148Right-handed alpha
Helix 7
7
A
153 166Right-handed alpha
Helix 8
8
A
177 195Right-handed alpha
Helix 9
9
A
200 218Right-handed alpha
Helix 10
10
A
230 239Right-handed alpha
Helix 11
11
A
245 264Right-handed alpha
Helix 12
12
A
270 282Right-handed alpha
Helix 13
13
A
285 291Right-handed 310
Helix 14
14
A
341 352Right-handed alpha
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There are 2 sheets in PDB entry 2V3N. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
330 338first strand
Strand 2
A
315 323anti-parallel
Strand 3
A
405 413parallel
Strand 4
A
380 386anti-parallel
Strand 5
A
390 392anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
356 362first strand
Strand 2
A
365 371anti-parallel
Strand 3
A
374 376anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il