Analysis of interatomic Contacts of Structural Units in PDB entry:
2V54


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V54 entry

There are 2 chains in PDB entry 2V54 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 204
B
 SER 2MET 204
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2V54. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 27Right-handed alpha
Helix 2
2
A
29 31Right-handed 310
Helix 3
3
A
43 54Right-handed alpha
Helix 4
4
A
60 74Right-handed alpha
Helix 5
5
A
75 85Right-handed alpha
Helix 6
6
A
94 105Right-handed alpha
Helix 7
7
A
108 117Right-handed alpha
Helix 8
8
A
131 136Right-handed alpha
Helix 9
9
A
147 162Right-handed alpha
Helix 10
10
A
176 195Right-handed alpha
Helix 11
11
B
16 27Right-handed alpha
Helix 12
12
B
43 54Right-handed alpha
Helix 13
13
B
60 74Right-handed alpha
Helix 14
14
B
75 85Right-handed alpha
Helix 15
15
B
94 105Right-handed alpha
Helix 16
16
B
108 117Right-handed alpha
Helix 17
17
B
131 137Right-handed alpha
Helix 18
18
B
146 163Right-handed alpha
Helix 19
19
B
176 193Right-handed alpha
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There are 2 sheets in PDB entry 2V54. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
88 92parallel
Strand 3
A
6 10parallel
Strand 4
A
124 128parallel
Strand 5
A
168 171parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 37first strand
Strand 2
B
88 92parallel
Strand 3
B
6 11parallel
Strand 4
B
124 128parallel
Strand 5
B
168 171parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il