Analysis of interatomic Contacts of Structural Units in PDB entry:
2V6E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V6E entry

There are 6 chains in PDB entry 2V6E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 4ASP 535
B
 VAL 4ASP 535
C
 C 1 G 25
D
 C 26 A 44
E
 C 1 G 25
F
 C 26 A 44
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 2V6E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 20Right-handed alpha
Helix 2
2
A
31 52Right-handed alpha
Helix 3
3
A
62 76Right-handed alpha
Helix 4
4
A
82 96Right-handed alpha
Helix 5
5
A
99 105Right-handed alpha
Helix 6
6
A
110 126Right-handed alpha
Helix 7
7
A
127 136Right-handed alpha
Helix 8
8
A
144 153Right-handed alpha
Helix 9
9
A
154 156Right-handed 310
Helix 10
10
A
159 164Right-handed alpha
Helix 11
11
A
171 195Right-handed alpha
Helix 12
12
A
199 205Right-handed 310
Helix 13
13
A
208 228Right-handed alpha
Helix 14
14
A
235 248Right-handed alpha
Helix 15
15
A
249 253Right-handed 310
Helix 16
16
A
258 260Right-handed 310
Helix 17
17
A
261 273Right-handed alpha
Helix 18
18
A
275 281Right-handed alpha
Helix 19
19
A
317 329Right-handed alpha
Helix 20
20
A
331 335Right-handed 310
Helix 21
21
A
336 341Right-handed alpha
Helix 22
22
A
351 373Right-handed alpha
Helix 23
23
A
380 395Right-handed alpha
Helix 24
24
A
398 402Right-handed 310
Helix 25
25
A
405 415Right-handed alpha
Helix 26
26
A
420 424Right-handed 310
Helix 27
27
A
444 453Right-handed alpha
Helix 28
28
A
454 458Right-handed 310
Helix 29
29
A
465 481Right-handed alpha
Helix 30
30
A
487 492Right-handed alpha
Helix 31
31
A
493 495Right-handed 310
Helix 32
32
A
500 509Right-handed alpha
Helix 33
33
B
10 20Right-handed alpha
Helix 34
34
B
31 52Right-handed alpha
Helix 35
35
B
62 76Right-handed alpha
Helix 36
36
B
82 96Right-handed alpha
Helix 37
37
B
99 105Right-handed alpha
Helix 38
38
B
110 126Right-handed alpha
Helix 39
39
B
127 136Right-handed alpha
Helix 40
40
B
144 153Right-handed alpha
Helix 41
41
B
154 156Right-handed 310
Helix 42
42
B
159 164Right-handed alpha
Helix 43
43
B
171 195Right-handed alpha
Helix 44
44
B
199 205Right-handed 310
Helix 45
45
B
208 228Right-handed alpha
Helix 46
46
B
235 248Right-handed alpha
Helix 47
47
B
249 253Right-handed 310
Helix 48
48
B
258 260Right-handed 310
Helix 49
49
B
261 273Right-handed alpha
Helix 50
50
B
275 281Right-handed alpha
Helix 51
51
B
317 329Right-handed alpha
Helix 52
52
B
331 335Right-handed 310
Helix 53
53
B
336 341Right-handed alpha
Helix 54
54
B
351 373Right-handed alpha
Helix 55
55
B
380 395Right-handed alpha
Helix 56
56
B
398 402Right-handed 310
Helix 57
57
B
405 415Right-handed alpha
Helix 58
58
B
420 424Right-handed 310
Helix 59
59
B
444 453Right-handed alpha
Helix 60
60
B
454 458Right-handed 310
Helix 61
61
B
465 481Right-handed alpha
Helix 62
62
B
487 492Right-handed alpha
Helix 63
63
B
493 495Right-handed 310
Helix 64
64
B
500 509Right-handed alpha
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There are 6 sheets in PDB entry 2V6E. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 234first strand
Strand 2
A
428 431parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 287first strand
Strand 2
A
292 296anti-parallel
Strand 3
A
309 313anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
514 516first strand
Strand 2
A
521 523anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 234first strand
Strand 2
B
428 431parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 287first strand
Strand 2
B
292 296anti-parallel
Strand 3
B
309 313anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
514 516first strand
Strand 2
B
521 523anti-parallel
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