Analysis of interatomic Contacts of Structural Units in PDB entry:
2V70


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V70 entry

There are 4 chains in PDB entry 2V70 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 505ASP 714
B
 ALA 505ASP 714
C
 ALA 505ASP 714
D
 ALA 505ASP 714
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2V70. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
599 602Right-handed 310
Helix 2
2
A
672 681Right-handed alpha
Helix 3
3
A
702 705Right-handed 310
Helix 4
4
B
599 602Right-handed 310
Helix 5
5
B
672 681Right-handed alpha
Helix 6
6
B
702 705Right-handed 310
Helix 7
7
C
599 602Right-handed 310
Helix 8
8
C
672 681Right-handed alpha
Helix 9
9
C
702 705Right-handed 310
Helix 10
10
D
599 602Right-handed 310
Helix 11
11
D
672 681Right-handed alpha
Helix 12
12
D
702 705Right-handed 310
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There are 12 sheets in PDB entry 2V70. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 513first strand
Strand 2
A
516 518anti-parallel
Strand 3
A
537 539parallel
Strand 4
A
562 564parallel
Strand 5
A
586 588parallel
Strand 6
A
610 612parallel
Strand 7
A
634 636parallel
Strand 8
A
658 660parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 548first strand
Strand 2
A
572 573parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 667first strand
Strand 2
A
690 693parallel
Strand 3
A
700 701anti-parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
511 513first strand
Strand 2
B
516 518anti-parallel
Strand 3
B
537 539parallel
Strand 4
B
562 564parallel
Strand 5
B
586 588parallel
Strand 6
B
610 612parallel
Strand 7
B
634 636parallel
Strand 8
B
658 660parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
547 548first strand
Strand 2
B
572 573parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
666 667first strand
Strand 2
B
691 693parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
511 513first strand
Strand 2
C
516 518anti-parallel
Strand 3
C
537 539parallel
Strand 4
C
562 564parallel
Strand 5
C
586 588parallel
Strand 6
C
610 612parallel
Strand 7
C
634 636parallel
Strand 8
C
658 660parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
547 548first strand
Strand 2
C
572 573parallel
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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
666 667first strand
Strand 2
C
690 693parallel
Strand 3
C
700 701anti-parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
511 513first strand
Strand 2
D
516 518anti-parallel
Strand 3
D
537 539parallel
Strand 4
D
562 564parallel
Strand 5
D
586 588parallel
Strand 6
D
610 612parallel
Strand 7
D
634 636parallel
Strand 8
D
658 660parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
547 548first strand
Strand 2
D
572 573parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
666 667first strand
Strand 2
D
690 693parallel
Strand 3
D
700 701anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il