Analysis of interatomic Contacts of Structural Units in PDB entry:
2V7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V7B entry

There are 2 chains in PDB entry 2V7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 22GLU 528
B
 LEU 22GLU 528
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2V7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 33Right-handed alpha
Helix 2
2
A
34 37Right-handed 310
Helix 3
3
A
51 68Right-handed alpha
Helix 4
4
A
84 97Right-handed alpha
Helix 5
5
A
108 120Right-handed alpha
Helix 6
6
A
130 140Right-handed alpha
Helix 7
7
A
163 170Right-handed alpha
Helix 8
8
A
205 215Right-handed alpha
Helix 9
9
A
22 221Right-handed alpha
Helix 10
10
A
236 244Right-handed alpha
Helix 11
11
A
244 251Right-handed alpha
Helix 12
12
A
262 273Right-handed alpha
Helix 13
13
A
281 290Right-handed alpha
Helix 14
14
A
296 300Right-handed 310
Helix 15
15
A
313 325Right-handed alpha
Helix 16
16
A
395 402Right-handed alpha
Helix 17
17
A
429 431Right-handed 310
Helix 18
18
A
440 449Right-handed alpha
Helix 19
19
A
483 496Right-handed alpha
Helix 20
20
A
522 528Right-handed alpha
Helix 21
21
B
24 33Right-handed alpha
Helix 22
22
B
34 37Right-handed 310
Helix 23
23
B
51 68Right-handed alpha
Helix 24
24
B
84 97Right-handed alpha
Helix 25
25
B
108 120Right-handed alpha
Helix 26
26
B
130 140Right-handed alpha
Helix 27
27
B
163 171Right-handed alpha
Helix 28
28
B
205 215Right-handed alpha
Helix 29
29
A
22 221Right-handed alpha
Helix 30
30
B
236 244Right-handed alpha
Helix 31
31
B
244 251Right-handed alpha
Helix 32
32
B
262 273Right-handed alpha
Helix 33
33
B
281 290Right-handed alpha
Helix 34
34
B
296 300Right-handed 310
Helix 35
35
B
313 325Right-handed alpha
Helix 36
36
B
395 402Right-handed alpha
Helix 37
37
B
429 431Right-handed 310
Helix 38
38
B
440 449Right-handed alpha
Helix 39
39
B
483 496Right-handed alpha
Helix 40
40
B
522 528Right-handed alpha
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There are 11 sheets in PDB entry 2V7B. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE, BF,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
40 43anti-parallel
Strand 3
A
253 255parallel
Strand 4
A
227 230parallel
Strand 5
A
277 280parallel
Strand 6
A
304 307parallel
Strand 7
A
328 333parallel
Strand 8
A
340 343anti-parallel
Strand 9
A
356 357anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 151first strand
Strand 2
A
123 127parallel
Strand 3
A
75 79parallel
Strand 4
A
99 102parallel
Strand 5
A
185 191parallel
Strand 6
A
199 204anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 366first strand
Strand 2
A
379 384anti-parallel
Strand 3
A
407 416anti-parallel
Strand 4
A
403 404anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 366first strand
Strand 2
A
379 384anti-parallel
Strand 3
A
407 416anti-parallel
Strand 4
A
422 427anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 464first strand
Strand 2
A
467 476anti-parallel
Strand 3
A
506 510parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 50first strand
Strand 2
B
40 43anti-parallel
Strand 3
B
253 255parallel
Strand 4
B
227 230parallel
Strand 5
B
277 280parallel
Strand 6
B
304 307parallel
Strand 7
B
327 333parallel
Strand 8
B
340 343anti-parallel
Strand 9
B
356 357anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 102first strand
Strand 2
B
75 79parallel
Strand 3
B
123 127parallel
Strand 4
B
147 151parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 191first strand
Strand 2
B
199 204anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
362 366first strand
Strand 2
B
379 384anti-parallel
Strand 3
B
407 416anti-parallel
Strand 4
B
403 404anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
362 366first strand
Strand 2
B
379 384anti-parallel
Strand 3
B
407 416anti-parallel
Strand 4
B
422 427anti-parallel
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There are 3 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
454 464first strand
Strand 2
B
467 476anti-parallel
Strand 3
B
506 510parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il