Analysis of interatomic Contacts of Structural Units in PDB entry:
2V7C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V7C entry

There are 2 chains in PDB entry 2V7C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 403VAL 577
B
 SER 397LEU 572
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2V7C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
406 409Right-handed 310
Helix 2
2
A
410 422Right-handed alpha
Helix 3
3
A
425 429Right-handed 310
Helix 4
4
A
430 453Right-handed alpha
Helix 5
5
A
484 496Right-handed alpha
Helix 6
6
A
499 512Right-handed alpha
Helix 7
7
A
521 544Right-handed alpha
Helix 8
8
A
548 569Right-handed alpha
Helix 9
9
B
400 408Right-handed alpha
Helix 10
10
B
409 411Right-handed 310
Helix 11
11
B
412 423Right-handed alpha
Helix 12
12
B
425 429Right-handed 310
Helix 13
13
B
430 450Right-handed alpha
Helix 14
14
B
471 477Right-handed alpha
Helix 15
15
B
480 496Right-handed alpha
Helix 16
16
B
499 513Right-handed alpha
Helix 17
17
B
515 519Right-handed 310
Helix 18
18
B
521 544Right-handed alpha
Helix 19
19
B
548 569Right-handed alpha
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There are 2 sheets in PDB entry 2V7C. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 455first strand
Strand 2
A
460 462anti-parallel
Strand 3
A
468 469anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
454 455first strand
Strand 2
B
460 462anti-parallel
Strand 3
B
468 470anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il