Analysis of interatomic Contacts of Structural Units in PDB entry:
2V7D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V7D entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 12 chains in PDB entry 2V7D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1SER 230
B
 GLY -1THR 229
C
 GLY -1THR 229
D
 GLY -1SER 230
P
 LYS 755ALA 757
P
 THR 759MET 762
Q
 LYS 755ALA 757
Q
 THR 759MET 762
R
 LYS 755ALA 757
R
 THR 759MET 762
S
 LYS 755ALA 757
S
 THR 759MET 762
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 2V7D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 16Right-handed alpha
Helix 2
2
A
18 31Right-handed alpha
Helix 3
3
A
37 68Right-handed alpha
Helix 4
4
A
73 104Right-handed alpha
Helix 5
5
A
111 132Right-handed alpha
Helix 6
6
A
136 157Right-handed alpha
Helix 7
7
A
164 181Right-handed alpha
Helix 8
8
A
184 202Right-handed alpha
Helix 9
9
A
210 227Right-handed alpha
Helix 10
10
B
2 16Right-handed alpha
Helix 11
11
B
18 31Right-handed alpha
Helix 12
12
B
37 69Right-handed alpha
Helix 13
13
B
73 104Right-handed alpha
Helix 14
14
B
111 132Right-handed alpha
Helix 15
15
B
136 157Right-handed alpha
Helix 16
16
B
164 181Right-handed alpha
Helix 17
17
B
184 202Right-handed alpha
Helix 18
18
B
210 228Right-handed alpha
Helix 19
19
C
2 16Right-handed alpha
Helix 20
20
C
18 31Right-handed alpha
Helix 21
21
C
37 68Right-handed alpha
Helix 22
22
C
73 104Right-handed alpha
Helix 23
23
C
111 132Right-handed alpha
Helix 24
24
C
136 157Right-handed alpha
Helix 25
25
C
164 181Right-handed alpha
Helix 26
26
C
184 202Right-handed alpha
Helix 27
27
C
210 228Right-handed alpha
Helix 28
28
D
2 16Right-handed alpha
Helix 29
29
D
18 31Right-handed alpha
Helix 30
30
D
37 68Right-handed alpha
Helix 31
31
D
73 104Right-handed alpha
Helix 32
32
D
111 132Right-handed alpha
Helix 33
33
D
136 157Right-handed alpha
Helix 34
34
D
164 181Right-handed alpha
Helix 35
35
D
184 202Right-handed alpha
Helix 36
36
D
210 227Right-handed alpha
Back to top of page
There are no sheets in PDB entry 2V7D
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il