Analysis of interatomic Contacts of Structural Units in PDB entry:
2V7E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V7E entry

There are 2 chains in PDB entry 2V7E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 155ARG 476
B
 GLY 155ARG 476
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 2V7E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
158 166Right-handed alpha
Helix 2
2
A
166 179Right-handed alpha
Helix 3
3
A
180 184Right-handed 310
Helix 4
4
A
198 207Right-handed alpha
Helix 5
5
A
218 230Right-handed alpha
Helix 6
6
A
265 267Right-handed 310
Helix 7
7
A
268 276Right-handed alpha
Helix 8
8
A
300 312Right-handed alpha
Helix 9
9
A
313 315Right-handed 310
Helix 10
10
A
324 328Right-handed 310
Helix 11
11
A
329 338Right-handed alpha
Helix 12
12
A
345 348Right-handed 310
Helix 13
13
B
156 166Right-handed alpha
Helix 14
14
B
166 180Right-handed alpha
Helix 15
15
B
181 184Right-handed 310
Helix 16
16
B
198 206Right-handed alpha
Helix 17
17
B
219 230Right-handed alpha
Helix 18
18
B
265 267Right-handed 310
Helix 19
19
B
268 276Right-handed alpha
Helix 20
20
B
300 312Right-handed alpha
Helix 21
21
B
313 315Right-handed 310
Helix 22
22
B
324 326Right-handed 310
Helix 23
23
B
327 337Right-handed alpha
Helix 24
24
B
345 348Right-handed 310
Helix 25
25
B
364 369Right-handed 310
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There are 8 sheets in PDB entry 2V7E. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 240first strand
Strand 2
A
210 215parallel
Strand 3
A
188 191parallel
Strand 4
A
252 256parallel
Strand 5
A
280 287parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 359first strand
Strand 2
A
290 298anti-parallel
Strand 3
A
383 397anti-parallel
Strand 4
A
418 429anti-parallel
Strand 5
A
340 342anti-parallel
Strand 6
A
474 475parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 359first strand
Strand 2
A
290 298anti-parallel
Strand 3
A
383 397anti-parallel
Strand 4
A
402 406anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 378first strand
Strand 2
A
434 444anti-parallel
Strand 3
A
448 457anti-parallel
Strand 4
A
463 469anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
236 238first strand
Strand 2
B
210 213parallel
Strand 3
B
188 191parallel
Strand 4
B
252 256parallel
Strand 5
B
280 287parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
354 359first strand
Strand 2
B
290 298anti-parallel
Strand 3
B
383 397anti-parallel
Strand 4
B
418 429anti-parallel
Strand 5
B
340 342anti-parallel
Strand 6
B
474 475parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
354 359first strand
Strand 2
B
290 298anti-parallel
Strand 3
B
383 397anti-parallel
Strand 4
B
402 406anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 378first strand
Strand 2
B
434 444anti-parallel
Strand 3
B
448 457anti-parallel
Strand 4
B
463 469anti-parallel
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