Analysis of interatomic Contacts of Structural Units in PDB entry:
2V7Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V7Z entry

There are 2 chains in PDB entry 2V7Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ASP 383
B
 SER 2ASP 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 2V7Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 59Right-handed alpha
Helix 2
2
A
80 87Right-handed alpha
Helix 3
3
A
115 136Right-handed alpha
Helix 4
4
A
151 166Right-handed alpha
Helix 5
5
A
175 183Right-handed alpha
Helix 6
6
A
229 250Right-handed alpha
Helix 7
7
A
256 277Right-handed alpha
Helix 8
8
A
299 306Right-handed alpha
Helix 9
9
A
306 313Right-handed alpha
Helix 10
10
A
313 324Right-handed alpha
Helix 11
11
A
327 331Right-handed 310
Helix 12
12
A
338 342Right-handed 310
Helix 13
13
A
343 354Right-handed alpha
Helix 14
14
A
367 381Right-handed alpha
Helix 15
15
B
52 57Right-handed alpha
Helix 16
16
B
69 74Right-handed alpha
Helix 17
17
B
80 89Right-handed alpha
Helix 18
18
B
115 136Right-handed alpha
Helix 19
19
B
151 166Right-handed alpha
Helix 20
20
B
175 183Right-handed alpha
Helix 21
21
B
230 249Right-handed alpha
Helix 22
22
B
256 274Right-handed alpha
Helix 23
23
B
299 312Right-handed alpha
Helix 24
24
B
313 324Right-handed alpha
Helix 25
25
B
338 342Right-handed 310
Helix 26
26
B
343 354Right-handed alpha
Helix 27
27
B
367 381Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 2V7Z. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 28first strand
Strand 2
A
15 22anti-parallel
Strand 3
A
6 10anti-parallel
Strand 4
A
141 146parallel
Strand 5
A
168 174parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 28first strand
Strand 2
A
15 22anti-parallel
Strand 3
A
38 39anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
41 44anti-parallel
Strand 3
A
66 68anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 97first strand
Strand 2
A
100 105anti-parallel
Strand 3
A
112 114anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 223first strand
Strand 2
A
205 213anti-parallel
Strand 3
A
193 200anti-parallel
Strand 4
A
333 337parallel
Back to list of sheets
Back to top of page

There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 288first strand
Strand 2
A
291 298anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 28first strand
Strand 2
B
17 22anti-parallel
Strand 3
B
6 10anti-parallel
Strand 4
B
141 146parallel
Strand 5
B
168 174parallel
Back to list of sheets
Back to top of page

There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 51first strand
Strand 2
B
41 44anti-parallel
Strand 3
B
66 68anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 97first strand
Strand 2
B
100 107anti-parallel
Strand 3
B
110 114anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 225first strand
Strand 2
B
205 213anti-parallel
Strand 3
B
193 200anti-parallel
Strand 4
B
333 337parallel
Strand 5
B
359 360parallel
Back to list of sheets
Back to top of page

There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
279 288first strand
Strand 2
B
291 298anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il