Analysis of interatomic Contacts of Structural Units in PDB entry:
2V9U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V9U entry

There are 8 chains in PDB entry 2V9U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1ASN 184
B
 GLY 1ASN 184
C
 GLY 1ASN 184
D
 GLY 1ASN 184
E
 GLY 1ASN 184
F
 GLY 1ASN 184
G
 GLY 1ASN 184
H
 GLY 1ASN 184
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2V9U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
54 57Right-handed 310
Helix 2
2
B
54 57Right-handed 310
Helix 3
3
C
54 57Right-handed 310
Helix 4
4
E
54 57Right-handed 310
Helix 5
5
F
54 57Right-handed 310
Helix 6
6
H
54 57Right-handed 310
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There are 13 sheets in PDB entry 2V9U. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, CA, DA, EA, FA, FB, GA, HA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 9first strand
Strand 2
A
15 27anti-parallel
Strand 3
A
38 51anti-parallel
Strand 4
A
139 151anti-parallel
Strand 5
B
173 177parallel
Strand 6
B
159 168anti-parallel
Strand 7
B
59 69anti-parallel
Strand 8
B
125 136anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 9first strand
Strand 2
A
15 27anti-parallel
Strand 3
A
38 51anti-parallel
Strand 4
A
139 151anti-parallel
Strand 5
B
173 177parallel
Strand 6
B
159 168anti-parallel
Strand 7
B
181 182anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 136first strand
Strand 2
A
59 69anti-parallel
Strand 3
A
159 168anti-parallel
Strand 4
A
181 182anti-parallel
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There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 136first strand
Strand 2
A
59 69anti-parallel
Strand 3
A
159 168anti-parallel
Strand 4
A
173 177anti-parallel
Strand 5
H
139 151parallel
Strand 6
H
38 51anti-parallel
Strand 7
H
15 28anti-parallel
Strand 8
H
2 9anti-parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 9first strand
Strand 2
B
15 28anti-parallel
Strand 3
B
38 51anti-parallel
Strand 4
B
139 151anti-parallel
Strand 5
C
173 177parallel
Strand 6
C
159 168anti-parallel
Strand 7
C
59 69anti-parallel
Strand 8
C
125 136anti-parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 9first strand
Strand 2
B
15 28anti-parallel
Strand 3
B
38 51anti-parallel
Strand 4
B
139 151anti-parallel
Strand 5
C
173 177parallel
Strand 6
C
159 168anti-parallel
Strand 7
C
181 182anti-parallel
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There are 11 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 9first strand
Strand 2
C
15 28anti-parallel
Strand 3
C
37 51anti-parallel
Strand 4
C
139 152anti-parallel
Strand 5
D
173 177parallel
Strand 6
D
159 168anti-parallel
Strand 7
D
125 136first strand
Strand 8
D
59 69anti-parallel
Strand 9
D
159 168anti-parallel
Strand 10
D
181 182anti-parallel
Strand 11
D
159 168anti-parallel
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There are 12 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 9first strand
Strand 2
D
15 28anti-parallel
Strand 3
D
38 51anti-parallel
Strand 4
D
139 151anti-parallel
Strand 5
E
173 177parallel
Strand 6
E
163 168anti-parallel
Strand 7
E
59 69anti-parallel
Strand 8
E
125 136anti-parallel
Strand 9
E
59 69anti-parallel
Strand 10
E
181 183first strand
Strand 11
E
158 161anti-parallel
Strand 12
E
59 69anti-parallel
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There are 9 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 9first strand
Strand 2
E
15 28anti-parallel
Strand 3
E
38 51anti-parallel
Strand 4
E
139 140anti-parallel
Strand 5
E
38 51anti-parallel
Strand 6
E
143 144anti-parallel
Strand 7
E
38 51anti-parallel
Strand 8
E
149 151anti-parallel
Strand 9
E
38 51anti-parallel
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There are 11 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
2 9first strand
Strand 2
F
15 28anti-parallel
Strand 3
F
38 51anti-parallel
Strand 4
F
139 151anti-parallel
Strand 5
G
173 177parallel
Strand 6
G
159 168anti-parallel
Strand 7
G
125 136first strand
Strand 8
G
59 69anti-parallel
Strand 9
G
159 168anti-parallel
Strand 10
G
181 182anti-parallel
Strand 11
G
159 168anti-parallel
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There are 7 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
125 136first strand
Strand 2
F
59 69anti-parallel
Strand 3
F
159 168anti-parallel
Strand 4
F
173 177anti-parallel
Strand 5
F
159 168anti-parallel
Strand 6
F
181 182anti-parallel
Strand 7
F
159 168anti-parallel
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There are 4 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
2 9first strand
Strand 2
G
15 28anti-parallel
Strand 3
G
38 51anti-parallel
Strand 4
G
139 151anti-parallel
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There are 7 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
125 136first strand
Strand 2
H
59 69anti-parallel
Strand 3
H
159 168anti-parallel
Strand 4
H
173 177anti-parallel
Strand 5
H
159 168anti-parallel
Strand 6
H
181 182anti-parallel
Strand 7
H
159 168anti-parallel
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