Analysis of interatomic Contacts of Structural Units in PDB entry:
2VCN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VCN entry

There is 1 chain in PDB entry 2VCN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ALA 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2VCN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 15Right-handed alpha
Helix 2
2
A
17 31Right-handed alpha
Helix 3
3
A
32 45Right-handed alpha
Helix 4
4
A
58 61Right-handed 310
Helix 5
5
A
62 67Right-handed alpha
Helix 6
6
A
68 72Right-handed 310
Helix 7
7
A
73 87Right-handed alpha
Helix 8
8
A
92 108Right-handed alpha
Helix 9
9
A
137 146Right-handed alpha
Helix 10
10
A
152 161Right-handed alpha
Helix 11
11
A
162 165Right-handed 310
Helix 12
12
A
188 197Right-handed alpha
Helix 13
13
A
205 214Right-handed alpha
Helix 14
14
A
216 227Right-handed alpha
Helix 15
15
A
227 244Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2VCN.

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 168first strand
Strand 2
A
177 178anti-parallel
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