Analysis of interatomic Contacts of Structural Units in PDB entry:
2VF2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VF2 entry

There are 2 chains in PDB entry 2VF2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 7GLY 290
B
 LEU 7GLY 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 2VF2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
50 55Right-handed alpha
Helix 2
2
A
58 64Right-handed alpha
Helix 3
3
A
87 104Right-handed alpha
Helix 4
4
A
114 127Right-handed alpha
Helix 5
5
A
152 164Right-handed alpha
Helix 6
6
A
166 176Right-handed alpha
Helix 7
7
A
180 184Right-handed 310
Helix 8
8
A
185 197Right-handed alpha
Helix 9
9
A
198 212Right-handed alpha
Helix 10
10
A
216 221Right-handed 310
Helix 11
11
A
221 225Right-handed 310
Helix 12
12
A
225 229Right-handed 310
Helix 13
13
A
245 248Right-handed 310
Helix 14
14
A
249 256Right-handed alpha
Helix 15
15
A
270 275Right-handed alpha
Helix 16
16
A
275 287Right-handed alpha
Helix 17
17
B
8 12Right-handed alpha
Helix 18
18
B
50 55Right-handed alpha
Helix 19
19
B
58 64Right-handed alpha
Helix 20
20
B
87 103Right-handed alpha
Helix 21
21
B
114 127Right-handed alpha
Helix 22
22
B
152 164Right-handed alpha
Helix 23
23
B
166 176Right-handed alpha
Helix 24
24
B
180 184Right-handed 310
Helix 25
25
B
185 197Right-handed alpha
Helix 26
26
B
198 209Right-handed alpha
Helix 27
27
B
216 221Right-handed 310
Helix 28
28
B
221 225Right-handed 310
Helix 29
29
B
225 229Right-handed 310
Helix 30
30
B
245 248Right-handed 310
Helix 31
31
B
249 256Right-handed alpha
Helix 32
32
B
270 275Right-handed alpha
Helix 33
33
B
275 288Right-handed alpha
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There are 2 sheets in PDB entry 2VF2. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 19first strand
Strand 2
A
23 31anti-parallel
Strand 3
A
67 71anti-parallel
Strand 4
A
38 42parallel
Strand 5
A
108 113parallel
Strand 6
A
131 137parallel
Strand 7
A
233 238parallel
Strand 8
A
259 264parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 18first strand
Strand 2
B
24 31anti-parallel
Strand 3
B
67 71anti-parallel
Strand 4
B
38 42parallel
Strand 5
B
108 113parallel
Strand 6
B
131 137parallel
Strand 7
B
233 238parallel
Strand 8
B
259 264parallel
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